Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06331 ATGAAACTGCTCAAGGTGGCAATATCTTTTACAAAGATTATTTTGATCTCTATTAGACCAGGCACAGAAACTCTGGGAAGAGTTCCCGGCACAGATGTGTTCAGTGATCTCCATCAGTATCCTATGGCTGTTAAGACTCCAGGGGTTGTAATAATACGCATCAAGTCTGCATTGCTTTGCTTTTCTAATGCCAATTCAGTCAGAGAAAGAATTCTGAGATGGATCACTCAGGAAGAAGCAGAGGGGAACAAGAACAAAGAAGACACCACCAGTAACATAATTCAACTCGTAATACTTGACACCTCAAATTTGGTGAGCATTGACACCTCGGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTAGTCTCAAGTGGGAAACAGTTAGCAATTGTCAACCCTCGGTGGCAAGTGATTTACAAGCTAAAAGTGACCAACTTTGTCAAGAAAATTGGAGGACGGGTCTTCTTGACTGTTGGAGAAGCTATTGATTGCAAGCTCGATGTCTAA 510 0.4176 MKLLKVAISFTKIILISIRPGTETLGRVPGTDVFSDLHQYPMAVKTPGVVIIRIKSALLCFSNANSVRERILRWITQEEAEGNKNKEDTTSNIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKQLAIVNPRWQVIYKLKVTNFVKKIGGRVFLTVGEAIDCKLDV. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06331 169 SUPERFAMILY SpoIIaa-like 44 164 IPR036513 -
Seca11g06331 169 Pfam STAS domain 40 162 IPR002645 -
Seca11g06331 169 ProSiteProfiles STAS domain profile. 59 166 IPR002645 -
Seca11g06331 169 FunFam Sulfate transporter 31 19 168 - -
Seca11g06331 169 Gene3D STAS domain 19 167 IPR036513 -
Seca11g06331 169 PANTHER SULFATE TRANSPORTER 4 164 IPR001902 GO:0016020|GO:0055085
Seca11g06331 169 CDD STAS_SulP_like_sulfate_transporter 40 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06331 Seca-Chr11 163685217 163686988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06331 3 164 Inorganic Solute Cotransporters AT5G10180 58.642 4.01e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06331 K17469 - gmx:100775538 263.462