Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06252 ATGTCGAAACCCTGGGGCAACATCGGAGCCTGGGCCGCAGACTCGGAGCGCGCCGAGGCCGAAGAGCGCGAAGCCGCGGCTTCAGCATCGGCCTCCGAGTCCGCCAACTTCCCCAGCCTCAAGGAAGCCGCTAACGCCAAGCCCAAAAAGAACAAGAAGATGTCGCTTTCTGAGTTTACCAAGAGCAGTTACGGCTCCGGCGGTGGTGGATTCGCCGCCGATAACCAGGGCTTGACGTCGGATGAGATGCTCCGCCTTCCCACGGCACCCAAGGAGCGTTCCGCGGATGAAATGCAGTTCAGCCGCTATGGCGGTGGTTTCTCTTCTTACGACAGGTCCGGTCCTCGCTCCCGGGAGCGCGACGGCGGCAACAGTGACGGTTCCTGGGGCGGTGGAAGAAGATCCTATAGCGGATTTGACGATGAACGCAGGGGTCCGAATTCTAGGGTTTCGGAACTCGATCAGCCGTCGAGAGCCGACGAGGTGGACAATTGGGCTTCCGTGAAGAAATCTCTCCCCTCGCTTGATTCTGGCCGGCAGAATCGATTCAGTGGCGGCAGTGGCGGTGGTTTCGGCGGTTCGTCCAGGGCGGATGAGGTTGATAACTGGGCGGTTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCGGCTATCGTGATTCTGGTTTCCGCGATTCTGGCTTTCGTGATTCCGGCTATCGTGATTCCGGCGTCGAGCCCGATCGCTGGTCGAGGGGACCGTCGCGTGAAATGGAGCGACCGAGGTTGGTTTTGGATCCGCCGAGAGGAGGCGATGGTTCTGTGAATGAAGCTCCGGCGAGGACGAATAGGCCTAATCCGTTTGGCGCTGCGAGGCCTAGGGAGCAAGTGCTGGCTGAGAAAGGATTGGATTGGAAGAAGATGGATTCGGAGATTGAAGCTAAGAAGACGAGTAGGCCAACGAGTTCACATTCCAGCAGGCCTTCCAGTGCTCAGTCAAGTCGATCGGAGGGTCCAGACGCAGTGCCGAAACCAAAACCGAAGGTGAATCCATTTGGGGACGCCAAACCCAGGGAAGTTTTGCTCGTCGAGCGAGGCATGGATTGGCGGAAGATTGATCTTGAATTGGAGCATCGTGGGGTTGACAGGCCTGAGACGATGGAAGAGAAATTATTAAAAGAAGAAATTGATAATTTGAAAAAGGAACTTGAGAAAGAGTCTACAATGAATTCAAGTAAGGAATCTGTGGATGAGGCTGCTGGAAATCAAACCAGTACACATGCACTGTTACTCCAGAAAGAAAGCGAGCTGGAACTTCTTATCCGTGATTTGGATGACAAAGTTCGATTTGGGCAGAAAGCTGTGGAAAGGCCTGGTTCATCAGCAGGAAGGTCTACTGGTCTTTCTGATAGGCCACCATCTCGATCTGGGTCATTTGAGGATTCTAGAAGTGTGGATTTTACAGACCGGCCCCGATCCCGTGGCACAGGAGATATGTGGATGCGTCCTAATGATGACAGAAGACAGTTTCAAGGTAGCAGGGAAAGGGGATGGTTTTCTAGCAACAGAGACTTGAATAGGTCAAGTTCAAGAGAAAGATGGTGA 1581 0.5395 MSKPWGNIGAWAADSERAEAEEREAAASASASESANFPSLKEAANAKPKKNKKMSLSEFTKSSYGSGGGGFAADNQGLTSDEMLRLPTAPKERSADEMQFSRYGGGFSSYDRSGPRSRERDGGNSDGSWGGGRRSYSGFDDERRGPNSRVSELDQPSRADEVDNWASVKKSLPSLDSGRQNRFSGGSGGGFGGSSRADEVDNWAVGKKPVPVRSSGYRDSGFRDSGFRDSGYRDSGVEPDRWSRGPSREMERPRLVLDPPRGGDGSVNEAPARTNRPNPFGAARPREQVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSSRSEGPDAVPKPKPKVNPFGDAKPREVLLVERGMDWRKIDLELEHRGVDRPETMEEKLLKEEIDNLKKELEKESTMNSSKESVDEAAGNQTSTHALLLQKESELELLIRDLDDKVRFGQKAVERPGSSAGRSTGLSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMWMRPNDDRRQFQGSRERGWFSSNRDLNRSSSRERW. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06252 526 MobiDBLite consensus disorder prediction 289 312 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 222 258 - -
Seca11g06252 526 Pfam Plant specific eukaryotic initiation factor 4B 1 509 IPR010433 GO:0003743
Seca11g06252 526 MobiDBLite consensus disorder prediction 1 351 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 444 526 - -
Seca11g06252 526 Coils Coil 381 401 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 394 416 - -
Seca11g06252 526 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 526 IPR010433 GO:0003743
Seca11g06252 526 MobiDBLite consensus disorder prediction 313 329 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 474 505 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 454 473 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 170 188 - -
Seca11g06252 526 MobiDBLite consensus disorder prediction 136 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06252 Seca-Chr11 162900355 162907186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06252 1 526 Eukaryotic Initiation Factors Gene Family AT3G26400 54.078 4.87e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06252 - - gmx:100784238 713.761