Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06251 ATGGGAGTCTTCACATTCGTCCTCCGCAAATCCGGCGGCGACTGGACCGCAAAGCAATATTCCGGCGACATCGAGGCCTCCGCCGATTCCACCTTCGACCTCCAACGGAAGCTCGTTCAAGCCGCTCTCGCCGTTGATTCCTCCGGTGGTGTTCAGTCCTCTTTCTCTCTCGTGTCTCCTTCCTCTGCTGTCTTCCAGGTAGTGATTGTGGGTGGTGCTGCAGTAATCGTTGGAGGTGGTGCTGCAGCTGCTCCTGCAGGAGGTGCTGCCTCAGGTGGCGATGCTGCCCCTGCTGCTGAGAAGAAAGAAGAAAAGGTCGAGGAAGAGGAGGAGGATGATGATTTGGGATTGTCACTCTTTGATTAG 366 0.5601 MGVFTFVLRKSGGDWTAKQYSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSLVSPSSAVFQVVIVGGAAVIVGGGAAAAPAGGAASGGDAAPAAEKKEEKVEEEEEDDDLGLSLFD. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06251 121 MobiDBLite consensus disorder prediction 105 121 - -
Seca11g06251 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 121 IPR044252 GO:0003735|GO:0005840
Seca11g06251 121 MobiDBLite consensus disorder prediction 82 121 - -
Seca11g06251 121 Pfam 60s Acidic ribosomal protein 71 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06251 Seca-Chr11 162890161 162891642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06251 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 75.000 1.40e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06251 K02942 - gmx:100804776 114.005