Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06244 ATGCTCACGAGGACGCACGAGCGTGGGTGTCGCTTGACGTACGACTATGTCACCGACTACGCCACCGATCTGCTTGGGGAGAAAGACTTGGACACGATCTCCGCCTTGCGTGGCTTGTTGATCTCACGCCCTGTCGATTCGAGCTTCTCCCACAAGAACGCGTTTCACCACTGCATCGAGCACGCCAAGCTGTGGCTTTCCAAGGCTGAACAGCCTATTGAGCCTAATGCCGGTGTTACATATGCTGGTTTGAGGGAGAAGTTGAACAAGATTATGTCTTCCGAGTATTTCACTACAACTCCTGAGATGAAAGCTCCGGTTGAAGTTGTTGTCGCAGCTGCTGCTGGAAATTATGGGTCTTTCCAGGTGCCAGTGCATGGCTCTGTGGTTCCGGTGGAAGTGGAAGGTTCGGATTCTCAGCCTCAGGAGAAGGCTCATCAAACATGGCTTCCAGTGGCAGAGTTGGCACTGCCTGAGGACAAGGGTGATCAGGTTTATGCTGTCGCATGGGCACCAAATATTGGAAGGTTGTTCCAAGTTCGCGGAAAACTGTATGAGCTGCTAATCAATTACATTCCCACAGAGATCATTTTGAAGAGGCTTCTTTATGAGCTATTGAGGAAATTGGATGCAGAACTAAAGCATGAAGTTTGCCATTGGGCTGCATATTACACCTGTTGTGTTTGCTTCCCCTCATTTGTTCTTAAGCAAGGATTCTTCTGTGGTTCTGATGTACCTTTGGGCATCCTACCTGCTGGTCAGGAAATAGCAGTAAAAAATTATCAAAAACTTCTGCACAAGGATTCAGACCTGAGTTACACTTCCCAACAGATTTTGAAAGAGAATTCAAATCCCAGCTCTGAGAAGAATGATGAAAGCAGTCTTTCTAGTTTAAGCTCAAAATCATCAGTGACAGAGAATGAGAGTGATCATGATAGTTCTCTTGCATTACTTCCTATGAATATGATAGCAACATCACAAGATGCCAAACTCGGCCCAAATGGTATAGGCCAAGTCATTGAGCCTAATATGCATGTCCAACTCCATGTCATTCGATCGAGTATATATGTTTATCCTCGCTTAGACCTATAA 1092 0.4597 MLTRTHERGCRLTYDYVTDYATDLLGEKDLDTISALRGLLISRPVDSSFSHKNAFHHCIEHAKLWLSKAEQPIEPNAGVTYAGLREKLNKIMSSEYFTTTPEMKAPVEVVVAAAAGNYGSFQVPVHGSVVPVEVEGSDSQPQEKAHQTWLPVAELALPEDKGDQVYAVAWAPNIGRLFQVRGKLYELLINYIPTEIILKRLLYELLRKLDAELKHEVCHWAAYYTCCVCFPSFVLKQGFFCGSDVPLGILPAGQEIAVKNYQKLLHKDSDLSYTSQQILKENSNPSSEKNDESSLSSLSSKSSVTENESDHDSSLALLPMNMIATSQDAKLGPNGIGQVIEPNMHVQLHVIRSSIYVYPRLDL. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06244 363 PANTHER GLYCINE-RICH PROTEIN 1 289 - -
Seca11g06244 363 Gene3D - 164 229 - -
Seca11g06244 363 SUPERFAMILY post-AAA+ oligomerization domain-like 168 226 IPR008921 GO:0003677|GO:0006260
Seca11g06244 363 MobiDBLite consensus disorder prediction 280 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06244 Seca-Chr11 162822787 162827823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06244 176 224 Core DNA Replication Machinery Family AT5G27740 79.592 6.15e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06244 - - gmx:100816406 213.001