Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06212 ATGGGGTACACACATTTGGTGGTGTTGTGTTTCTGGGGGATGCTTCTAATACCTTCCTTGTGTCAAGATGATTCAGATGATGTAACTACTGCTGTGTACATTGTTACTCTCAGACAAGCCCCTGCTTCTCACTATGAGGATGAGTTGACCAGAGTGGGTAACCACTTCAGACATGGTAGTTCTGGGAGAACTAGACTTCACAAACCAAGACATTCAAATGTTACAAAGACAGATAGGAGACATGGCTCTTACATTGCCCAAATTCATGACTCGTTGTTGAGGAAGGTGTTTAAAGGGGAGAAATATCTGAAACTCTATAGCTATCATTACTTGATCAATGGGTTTGCTGTGCTGGTTACCCAACAGCAGGCAGAGAAGCTATCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTAAGAACTGCAACCACCCATACTCCACAATTTTTAGGTCTGCCACAGGGAGCTTGGTTTCAATCAGGTGGGTTTGAAACTGCTGGAGAAGGAATCACAATTGCCTTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAAATCTGAACATCCATTCCCTGTTCCTGCTCATTTTTCTGGCATTTGTGAGGTTACTAGGGATTTTCCATCTGGTTCTTGTAATAGGAAGCTTGTTGGAGCCCGTCATTTTGCAGCATCTGCTATAACCAGAGGAATATTCAATTCATCTGAGGACTATCCTTCTCCTTTTGATGGTGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCTGTGGTTGTTGCTGGGCATCATTTCGGAAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAAAGATTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCACAGGATAGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTCCTGGTATTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGAAATACTGGACCATCACCTATGAGCATGTCCTCTTTTAGTCCATGGATTTTTACTATTGGTGCCACCTCTCATGATCGAGCTTATAGCAACTCCCTATTACTTGGAAATAATTTAACCATACTTGGAGTTGGACTTGCACCTGGCACAGATGAGAACACACTGTATAAATTGATTCATGCAAAGCATGCTTTGAACAATGAAACAACGGTTGCCGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAACTCGATCAGGATTTGGTCCAGGGCAACCTCTTGATCTGCAGCTATTCAATCCGATTTGTGCTTGGGCTCTCCAGCATCAAACAGGCCTTAGAAACAGCCAAGAACCTTAGTGCAGTTGGTGTTATTTTTCCCATGGATCCTTTTGTGACTGGTTATCAGCTTAACCCAATTCCAATGAAAATACCCGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTTCTGAAGTACTACAATTCTTCACTGGAAACAGATGAGGCTTCAAATAAAATTGTGAAATTTGGGGCCGTTGCTAGCATTTGTGGTGGACTAAAAGCCAACTACAGTAATGTTGCCCCAAAGGTTATGTTTTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATGAAGCTGACATTTTGAAACCCAATTTGGTAGCTCCTGGAAATTTTATATGGGCTGCTTGGAGTTCTCTTGCCACTGATTCAGCTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAGTTAAACAAAAGTTTCCCAATTTCAGTCCTGCAGCCATTGGATCTGTGCTTTCCACCACAGCTTCTCTGTTTGACAACAATGGGAAGCCAATAATGTCTCAGCGATCATATGCCTCCCCAGACCTAAACCAATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTAAATCCGGGATTGCTTTTTGATTCTAGTTATGATGATTACATGTCATTTCTATGTGCTATCAATGGTTCAGCTCCTGTATTGCTAAACTATACCGGTCAGAACTGTTGGATGTATAATTCTACTGTATATGGCTCTGATCTGAACTTACCCTCAATCACAATAGCAAATTTGAACCAATCTAGAGTAGTACAGAGAACAGTCCAAAACATTGCTGGAAATGAAGCTTACAGTGTTGGTTGGAGTTCTCCATATGGGGTTTCAGTGAAAGTATCTCCAACTCACTTCTCTCTTGCCAATGGGGAGAAACAAGTCTTGTCTGTGATCTTTAATGCAACCAGCAACAGCTCTGCTGCCAGCTTTGGGAGGATTGGGCTGTTTGGTAACCAAGGTCATGTAGTCAACATTCCTGTGTCAGTCATCGTTAAAATCTCATATAACTTCACTATGAGCTAA 2532 0.4269 MGYTHLVVLCFWGMLLIPSLCQDDSDDVTTAVYIVTLRQAPASHYEDELTRVGNHFRHGSSGRTRLHKPRHSNVTKTDRRHGSYIAQIHDSLLRKVFKGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWFQSGGFETAGEGITIAFVDTGIDPTHPSFADDKSEHPFPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSSEDYPSPFDGDGHGTHTASVAAGNHGIPVVVAGHHFGNASGMAPRSHIAVYKALYKRFGGFAADVVAAIDQAAQDRVDIICLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTIGATSHDRAYSNSLLLGNNLTILGVGLAPGTDENTLYKLIHAKHALNNETTVADDMYVGECQDASKLDQDLVQGNLLICSYSIRFVLGLSSIKQALETAKNLSAVGVIFPMDPFVTGYQLNPIPMKIPGIIIPSANDSKIFLKYYNSSLETDEASNKIVKFGAVASICGGLKANYSNVAPKVMFYSARGPDPEDSLPHEADILKPNLVAPGNFIWAAWSSLATDSAEFLGENFAMMSGTSMAAPHVAGLAALVKQKFPNFSPAAIGSVLSTTASLFDNNGKPIMSQRSYASPDLNQSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCAINGSAPVLLNYTGQNCWMYNSTVYGSDLNLPSITIANLNQSRVVQRTVQNIAGNEAYSVGWSSPYGVSVKVSPTHFSLANGEKQVLSVIFNATSNSSAASFGRIGLFGNQGHVVNIPVSVIVKISYNFTMS. 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06212 843 Gene3D - 385 543 - -
Seca11g06212 843 SUPERFAMILY Subtilisin-like 145 697 IPR036852 GO:0004252|GO:0006508
Seca11g06212 843 Pfam Peptidase inhibitor I9 32 145 IPR010259 -
Seca11g06212 843 Gene3D - 710 834 - -
Seca11g06212 843 ProSitePatterns Serine proteases, subtilase family, serine active site. 616 626 IPR023828 -
Seca11g06212 843 Pfam Fibronectin type-III domain 739 832 IPR041469 -
Seca11g06212 843 PRINTS Subtilisin serine protease family (S8) signature 170 189 IPR015500 -
Seca11g06212 843 PRINTS Subtilisin serine protease family (S8) signature 250 263 IPR015500 -
Seca11g06212 843 PRINTS Subtilisin serine protease family (S8) signature 615 631 IPR015500 -
Seca11g06212 843 CDD PA_subtilisin_like 391 526 - -
Seca11g06212 843 CDD Peptidases_S8_3 145 652 IPR034197 -
Seca11g06212 843 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 143 IPR037045 -
Seca11g06212 843 Gene3D Peptidase S8/S53 domain 172 706 IPR036852 GO:0004252|GO:0006508
Seca11g06212 843 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 98 831 IPR045051 -
Seca11g06212 843 Pfam Subtilase family 170 658 IPR000209 GO:0006508|GO:0008236
Seca11g06212 843 ProSiteProfiles Serine proteases, subtilase domain profile. 150 693 - -
Seca11g06212 843 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 175 186 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06212 Seca-Chr11 162498614 162504563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06212 6 837 Subtilisin-like Serine Gene Family AT4G20430 69.550 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06212 - - gmx:100814065 1405.96