Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06177 ATGTATATGCATGTTTTGGGTAAATTATTCAGGAAAGGAAGCAAATTAAAGTTTCTATCTTTGAATTTTCCCCCTCATCTAGGTTCTGGGAAAATAAAACAGAAACTTTTGCAATCGGGTATTGATTCTGCTTTTATGGCAAATTCAAAGGGCTCATCGGGTATCAGAAACTTCATGTATCCTGGAAAGCATCCTCTGCTTCCTCCTAAAAGTCCATTCCCTAGTGTTTCTCAAGCATATGTTGATTATGTCCCAAATCCTGCAGTTGGTCCAAAGGCTGCTAACAAGCTTAGAGAGGGAAACACACACCACCAACGTACTTCATCTGAGAGCCTTGTTATTGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTTCGAAAGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATACATAGACACAGTCAATGTTTCTAACATCAGTTATGCAGATCAGGATGAGTATAAATATAAGAATTTGATGTCTATTCCATCTTGGTCATCTCAGGACTTTGACCGCATTAAGGATGCTCGTCATGTACCCGTGTATGCAGAAATGAACGCAGCAAGACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCTGTGACAAATCTGGCCGGTGTTCCATCTGGCAAAGACAATGTTGCTTTTCATTGTTCAGGATCACCGACACCATGTATACCACATGAAGCTGATGGGCTCCCACCAACTGCAAATGAAAAACAGAATTCAGTAGAATCTGGCTTACAGGATGCAAAATCATCTTATGATAAAAAGGATGGTTCACATGCAAAGTCTTCTTCTTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGCAAACTTCAGTACATTGCTGAGTTGGAAAGAAATGTACAAGCTTTACAGGTAGAAGGGTCTGAAGTCTCAGCTGAGCTTGAATTTCTTAACCAGCAGAATCTCATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCACGAAGTACTGGAAAGAGAGATTGGAAGATTGCGTGCATTATATCAGCAGCAGCTGCAGCAACCACATCAGCCCCAACAACAACAACAACCATCTTCTAGTCATAGACGCACAAACAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTATAAAGCACAAGGACACCAATTCAGGGCATGACCCTGCAACTGGAGCACTCAGAATTTAG 1284 0.4151 MYMHVLGKLFRKGSKLKFLSLNFPPHLGSGKIKQKLLQSGIDSAFMANSKGSSGIRNFMYPGKHPLLPPKSPFPSVSQAYVDYVPNPAVGPKAANKLREGNTHHQRTSSESLVIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYIDTVNVSNISYADQDEYKYKNLMSIPSWSSQDFDRIKDARHVPVYAEMNAARQKNRSWDSFSNAVTNLAGVPSGKDNVAFHCSGSPTPCIPHEADGLPPTANEKQNSVESGLQDAKSSYDKKDGSHAKSSSSETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQVEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEHEVLEREIGRLRALYQQQLQQPHQPQQQQQPSSSHRRTNSRDLESQFANLSIKHKDTNSGHDPATGALRI. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06177 427 SUPERFAMILY Leucine zipper domain 291 333 IPR046347 GO:0003700|GO:0006355
Seca11g06177 427 Gene3D - 284 337 - -
Seca11g06177 427 MobiDBLite consensus disorder prediction 237 291 - -
Seca11g06177 427 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 55 409 IPR044797 -
Seca11g06177 427 CDD bZIP_plant_RF2 282 330 IPR044759 GO:0003700|GO:0006355
Seca11g06177 427 MobiDBLite consensus disorder prediction 374 393 - -
Seca11g06177 427 Coils Coil 358 378 - -
Seca11g06177 427 MobiDBLite consensus disorder prediction 247 261 - -
Seca11g06177 427 SMART brlzneu 280 339 IPR004827 GO:0003700|GO:0006355
Seca11g06177 427 MobiDBLite consensus disorder prediction 374 427 - -
Seca11g06177 427 Coils Coil 302 350 - -
Seca11g06177 427 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06177 Seca-Chr11 162221537 162227199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06177 67 354 bZIP Transcription Factor Family AT2G42380 28.758 6.13e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06177 - - gmx:100813098 627.091