Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06151 ATGAAGTATCATAGCATACTTGAGACAGGCCTCCCAAATTCCAACCGTCTATTATTCATCGCCATCCTTGAAGTTCACAAGCATCCAGGCTCAATCTCCACTAATAGCAGCCAAGCTAATCTACCTGAGGATGAAAGAAATATCTGGTCAAAGAATAACAACAAAAAAAAACAAGTTTTTGGACCCATCCCTGAGGTAACCCCTCAATTTTTGCAATTAAATTATCTTAATGTCTCTCATAATTTCCTTAGCAGCTTTCTCCCAAGAGTCTTAACACAATATCCAAAGCTTAAAGTGCTTGATGTTAGTTCCAACAAGTTAGATGGAATATTTCTAGCTGATCTTCTCACAGTACTCACTCTGCAAGAGCTCCATCTTGAAAATAATATGATCTCAGGAAGCATTAACATATCATCCTCTTCTCTTAGTCAATCTGATCTTCGGATTCTTGAACTTTCTCACAACCAGTTTAGTGGTTATTTTCCTGTTGAGTTTGGGTCACTAATTGGCCTGAAAGTGCTTAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACTACCATTTCTAACATGAGTTCATTAGACTCCTTGGATATATCAGAGAACCATTTTATAGGTCCTTTACCAATTAACATGCCTAAGGGGCTAAAAAATTTTAATGCTTCAAATAATGATCTATCTGGAGTTGTCCCAAGAAATCTTAGGAAGTTCCCCAGTTCTTCCTTCTATCCTGGGAATGCTAGGTTACATTTTCCAAATGGTCCTCTTGAATCAACCAATAAGCCAGGTGAAAGTTCCAATAGGAAGCCTGTAAACACTATTGTTAAAGTAATAATCATAGCATCAGGTGTGGTTGCTGCTCTCTTCATATTAATCCTGCTTGCTGTCATAGTACACTGCATCTGTATATCAAGGTCTCCATCAGAGTATGCTACTAATAAGGACAACAATGAACATGCTCAACCACGCATCACTGGCCCTGGTCGTGCAAGAGACTCAGGTGGTGCTTTGGTTGTATCAGCTCAGGATCTTGTGACCTCACAAAAAGGATCATCATCAGAGATAATCAGACATGATGAAAAAATAGCATCTGTAAAACTGAGTTCTCCCCATCAAAAAGTAGCCACATTTTATCATCTGACTCTGGAGCTCTCCAGAGCTCCAGCTGAAGTTTTAGGGAGAACCAGTCATGGGACATCATACAAGGCCACTCTAGAGAATGGTTTATTGTTGAGAGTGAAGTGGCTGAGAGAAGGAGTGGCAAAAGGGAGAAAAGAATTTACTAAAGAGGCTAAAAAATTTGCAAACATCAGGCATCCCAATGTTGTGGGATTGAAGGGGTACTATTGGGGTCCTACACAGCATGAGAAACTTCAGATTACATCTCTCCAGGAAGTCTTGCAAGTTTTCTATATGAACTATCTCCATCTTGATCGTGCTATTCCTCATGGGAACTTCAAAGCAACAAATGTGTTGCTAGATACAGCTGACTTGAATGCATGTGTAGCTGATTACTGCCTCCACAGACTTATGACTCAGGCTGGTACCATTGAACAGATTCTACATGCTGGGGTCTTGGGTTATTGTGCACCAGAGTTGGCTACTTCCAAGAAACCAATGCCCTCCTTCAAATCAGATATTTATGCATTTGGGGTGATACTTTTGGAACTTTTAACTGGAAGGTGTGCTGGTGATGTTATATCTGGTGAGGAGGAAGTTGTTGATCTCACAAATTGGGTAAGGTTGCGTGTTGCACAAGGTAGAGGCTCAGAATGTTTTGATGCTGCGTTGATGTCAGAAATGGGTAATTTAGTTGTAAAAAAGGGAATGAATGAGGTACTTGGAATAGCTATTCAATGCATAAGATCTGTTTCTGAGAGGCCAGGCATCAAGACTGTATATGCAGATCTTTCTTCTATAAAGTCTGCTCATGCTACTTGA 1944 0.3997 MKYHSILETGLPNSNRLLFIAILEVHKHPGSISTNSSQANLPEDERNIWSKNNNKKKQVFGPIPEVTPQFLQLNYLNVSHNFLSSFLPRVLTQYPKLKVLDVSSNKLDGIFLADLLTVLTLQELHLENNMISGSINISSSSLSQSDLRILELSHNQFSGYFPVEFGSLIGLKVLNIAGNNFSGSLPTTISNMSSLDSLDISENHFIGPLPINMPKGLKNFNASNNDLSGVVPRNLRKFPSSSFYPGNARLHFPNGPLESTNKPGESSNRKPVNTIVKVIIIASGVVAALFILILLAVIVHCICISRSPSEYATNKDNNEHAQPRITGPGRARDSGGALVVSAQDLVTSQKGSSSEIIRHDEKIASVKLSSPHQKVATFYHLTLELSRAPAEVLGRTSHGTSYKATLENGLLLRVKWLREGVAKGRKEFTKEAKKFANIRHPNVVGLKGYYWGPTQHEKLQITSLQEVLQVFYMNYLHLDRAIPHGNFKATNVLLDTADLNACVADYCLHRLMTQAGTIEQILHAGVLGYCAPELATSKKPMPSFKSDIYAFGVILLELLTGRCAGDVISGEEEVVDLTNWVRLRVAQGRGSECFDAALMSEMGNLVVKKGMNEVLGIAIQCIRSVSERPGIKTVYADLSSIKSAHAT. 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06151 647 FunFam Leucine-rich repeat receptor-like protein kinase 376 464 - -
Seca11g06151 647 Pfam Leucine rich repeat 147 205 IPR001611 GO:0005515
Seca11g06151 647 Pfam Protein kinase domain 473 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06151 647 Gene3D Phosphorylase Kinase; domain 1 351 458 - -
Seca11g06151 647 ProSiteProfiles Protein kinase domain profile. 387 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g06151 647 MobiDBLite consensus disorder prediction 312 335 - -
Seca11g06151 647 SUPERFAMILY L domain-like 59 240 - -
Seca11g06151 647 SUPERFAMILY Protein kinase-like (PK-like) 390 637 IPR011009 -
Seca11g06151 647 Gene3D Transferase(Phosphotransferase) domain 1 459 647 - -
Seca11g06151 647 Gene3D Ribonuclease Inhibitor 31 262 IPR032675 -
Seca11g06151 647 PANTHER OS07G0626500 PROTEIN 473 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06151 Seca-Chr11 161902807 161907071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06151 114 642 Receptor kinase-like Gene Family AT3G08680 31.034 3.31e-56 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca11g06151 Pkinase 1.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06151 - - gmx:100795611 798.505