Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06138 ATGGAAGGCATGGAGAGTAGTAGTGACAATGCTGAGCCCATGAACGATCGAAAGCCATCATGGGCAAAACTTGGTCATGTAGATTCCCTCAATTTGGAGGCTGCAAGGATTCCCTCAACCAAAACCCATGCATTCAAGACAAGTTGGGTGAGGACATTGAGTTTAGCATTTCAGAGCATAGGGATCATATATGGGGACATAGGAACTTCTCCTTTGTATGTGTATGACAGCACCTTCACTGATGGTATAGGCACTACTCATGACCTTCTTGGATGCTTGTCTCTCATCATCTATACCATTGCACTCGTTCCTTTTGTTAAGTATATCCTCGTCGTTTTGTGGGCGAACGACAATGGTGACGGTGGTACTTTTGCATTGTATTCATTGATTTGCCGGTACGCGAAGGTGGGCTTAATTCCAAATCAGCAACCAGAAGACAGAGAGCTTTCCCATTACAAACTAAAAACACCTTCCAACCAATTAAAAAGGGCACAAAAGATTAAGCATAAGCTAGAGAATAGCAAATTCGCTAAACTTGTGCTTTTCCTTGTTACTATCATGTCAACCTCCATGGTCATCGGAGATGGAATTCTTACACCATCCATTTCAGTCCTTTCAGCAGTTAGCGGGATCAAAAACAGAAGTTCATCACTTGGCCAAGGTGCTGTTGTTGGGATCTCTATAGCAATCCTGATAATTCTGTTCTCAGTCCAGCGATTTGGCACTGATAAAGTTGGCTTCACATTTGCCCCAATGGTGTTAGTGTGGTTTACATTCATCGGAGGCATAGGTCTTTACAACTTGTTCAAATACGATATTGGTGTATTGAGAGCTTTCAATCCAAAGTACATTGTTGATTACATGAAAAGAAATGGTAAAGATGGTTGGATTTCTCTTGGTGGAATTTTTCTATGCATTACAGGGACTGAAGCTATGTTTGCTGACTTGGGCCACTTCAACGTGCGAGCAGTTCAAATTAGTTTCTCTTTTGTTACATTTCCTGCACTAGTTTGTGCATACAGTGGACAAGCAGCATATCTTAGAAAGTTCCCAGAACAAATTGGGAATACTTTTTATAACTCAATACCTGATCCAATATTTTGGCCAACATTTGTTGTGGCGGTTGGTGCTGCTATCATTGCAAGCCAGGCTATGATTTCAGGGGCATTTTCTATTGTCCAGCAGTCTCAAAGTTTGGGATGCTTCCCTAGTGTTAGGGTCATACATACCTCAGCTAAGTATGAAGGTCAAGTGTACATACCTGAGATCAACTTCATTCTTATGACTGCTTGTGTCATAGTCTGTGCTGCTTTCAAAACCACAGATAACATTGGTCATGCTTATGGTATGTATGCTTATATTAAGAACTTCAATCTCTATACAAGTACTATTTTATTTTTCTTCAGAGTAATAAAAAGCCAAAGTGTCACTTAA 1434 0.4059 MEGMESSSDNAEPMNDRKPSWAKLGHVDSLNLEAARIPSTKTHAFKTSWVRTLSLAFQSIGIIYGDIGTSPLYVYDSTFTDGIGTTHDLLGCLSLIIYTIALVPFVKYILVVLWANDNGDGGTFALYSLICRYAKVGLIPNQQPEDRELSHYKLKTPSNQLKRAQKIKHKLENSKFAKLVLFLVTIMSTSMVIGDGILTPSISVLSAVSGIKNRSSSLGQGAVVGISIAILIILFSVQRFGTDKVGFTFAPMVLVWFTFIGGIGLYNLFKYDIGVLRAFNPKYIVDYMKRNGKDGWISLGGIFLCITGTEAMFADLGHFNVRAVQISFSFVTFPALVCAYSGQAAYLRKFPEQIGNTFYNSIPDPIFWPTFVVAVGAAIIASQAMISGAFSIVQQSQSLGCFPSVRVIHTSAKYEGQVYIPEINFILMTACVIVCAAFKTTDNIGHAYGMYAYIKNFNLYTSTILFFFRVIKSQSVT. 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06138 477 Pfam K+ potassium transporter 56 471 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g06138 477 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 454 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g06138 477 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g06138 477 NCBIfam potassium uptake protein 55 459 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06138 Seca-Chr11 161806311 161811941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06138 1 450 Inorganic Solute Cotransporters AT4G13420 68.202 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06138 K03549 - cave:132179788 683.715