Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06096 ATGGATGTGGAAAACACAGAAAGTTCTATTGCTAAGGGTACAAAAGATCATGAGAGAATTGATCATGTGTCTAATGAGGCTACTATTGATGAGCAACCTAATCGTTGTTCTAGCATTGGAATGGAATTTGATTCCCTTGAGGATGTTAAAGAGTTATACACATCATTTGCTAAGAAAACGGGTTTTAGTATTCGTACTCGTTCAACTAAAGAGAATTTTTGTATACTTGTATGTTCTAATGAAGGCAAGCATATAATCAAGAATGGTGGGGAAGAGGAATGTAATGTTTGCATGGGAAAAACAAAGAAAAAGTGCTCAACTTCAAGAACAGGTTGTAAGACATCACTTATTGTTTCAAAAGCATGGAAGAGAAGCAAATGGATTATCAAAAGCTTTGATAATGTTCATAATCATGCCATGATCAGCCCTAAGAGTGTGAGCTATCTTCGATGTCATAAGAAAATGAGCAAAGCGGCTAAAAACCTTGTTGAGAAGTTTGATGAAGAAGGGGTACCTACAAGAAAGGTTGCCGCAATGTTTAATGGTGGAGATATATCTTTCTCTAACGGGGATTGCTGGAATCATCTTAGAAATGTTAGAAGAAGAAATCTTGATATTGGAGATGCCCAAGCTGTTTTGAACTTTTGTAAAGAAAAGCAAGCTGAAAATCCAAATTTCTTCTATGCAATACAATGTGATGATGAAGATAGAAATGATAAAATTTTTTTGGGTAGATGCAAGATCAAGAATGATGAGACTGAGAAGACTTTCAAATGGCTATTTCACACTTGGCTCGAGGCAATGGGTGGAAAAAGTCCCGTGTCAATAATAACATATCAAGATTTGGCAATGAAAGTTGCTATAGCCAAGATTGGGGAGCATGCTACATCAATTTATACAAGAGCCATTTTTGGGAAGTTTCATGATGAACGGGCTAAGATTAATCAATTCACAAAGGAGAAGATTGAAAAGAATGGGTCTCAGTATACATACAGGGTATCCAACTGTTTTGAGTCTCGGGACACAGTTACGGTTTGTGTGGATCTTGATACAAAGAGCGTTGGACAAAAGACGCTAAACAGGGGCATTGGATTTAATGAAAATGGAGCAACTTCTTCATGTGATGCTAATAATTCAGCAACTCTGCGAAGTATACATATGCATAGTCAAGCTAGTTTATTATCTGATCTTGCTGCAAAATCTGAGAAGTTATACATGTTCATATCATCTGAAATGGAGCAAACATACAAAAGAGCTACCGTGGTTAAAAATACTTTTCATGTTAATAATAGCTCTTTTAAGAAGTCTTTAAGTTGA 1317 0.3607 MDVENTESSIAKGTKDHERIDHVSNEATIDEQPNRCSSIGMEFDSLEDVKELYTSFAKKTGFSIRTRSTKENFCILVCSNEGKHIIKNGGEEECNVCMGKTKKKCSTSRTGCKTSLIVSKAWKRSKWIIKSFDNVHNHAMISPKSVSYLRCHKKMSKAAKNLVEKFDEEGVPTRKVAAMFNGGDISFSNGDCWNHLRNVRRRNLDIGDAQAVLNFCKEKQAENPNFFYAIQCDDEDRNDKIFLGRCKIKNDETEKTFKWLFHTWLEAMGGKSPVSIITYQDLAMKVAIAKIGEHATSIYTRAIFGKFHDERAKINQFTKEKIEKNGSQYTYRVSNCFESRDTVTVCVDLDTKSVGQKTLNRGIGFNENGATSSCDANNSATLRSIHMHSQASLLSDLAAKSEKLYMFISSEMEQTYKRATVVKNTFHVNNSSFKKSLS. 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06096 438 Pfam FAR1 DNA-binding domain 52 140 IPR004330 -
Seca11g06096 438 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 290 IPR031052 GO:0006355
Seca11g06096 438 MobiDBLite consensus disorder prediction 1 27 - -
Seca11g06096 438 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06096 Seca-Chr11 161381005 161383024 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g06096 FAR1 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06096 - - tpra:123895864 357.066