Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06091 ATGAAGTGGGGTGGAAGAAAACCTTCTTCTTCTTCTTCTTCTCCTTCTCCCACTTCTAAGCCTTCTTTCATTTCTCATGTGTCTCCTTTTTCCTGGCTTTCCAAGTTCAAGCAGATGAGAATCAACTCAGAGCCAAAACCAGGAAAGCTGAAGCAGAATGCAAAGCAGAATTCTCCATGTGATAGTTCACCACAGTATGCTTGTGGAAATAGAGGCAGATTTTATGGAGGGGATGATGATGCTTTCTGGAGATTATCCTTCAGTGAAGAGGTCAATGAGCATAAGAAGAATGAAGATATTCTGAAACCAGTAGTGTACAATTTGGATGCTGAGCATGTCATTCCATCCTCAAGTGTTAGACTGAATGCTAAAAGACATGGAAGAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGCACTCAGAAGGATATTGGACTGAGAGAAGAAAGAAAATTGGTGAATGAAACAAAGAGTGCAAAGGAACTTGAATGCTTAAAGAGGAGATATGAGAGGAAAGCACAAAGAGTCTTGCAAGAGCAACTCTTGAACTTAGAAAAAGCAGAAGAGGAAGCTGAATTTGCTTCAAGTAAATTCTTAGAAAAGGATGAGCTGCAATTTGCATCACCTAGAACAATTTGTACACCAAGAAAGCATTTGTTTCCCTCTTCTTTAGATGCAAAGATTTCTGGCCTTGGAAGCATTAGAGAAGGTAGTGTATCTGAGGAGTTGAAAGGAAAATTTAACAAACAAAGGAAATCACTTCATGTGAGCAGAGAACTCCAGAGGAGGAAACCAAAGCACAGCTCCAAGGTAAGAGTATATTCTCCAAGGATGGCTTCCAAGGTTGAAATATGCAGAATAAAGGCTAAAGAAGAGAAGAAGAAAGCAAAGCTAAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAAATGTAGGATTAGATCACTTTGCTGTGGTGAAATGTTCATTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAGATGATCACAGAGAAACAGATCAGCAAGCCAGAAGAAATGGAAGAGCTCTTAGCATGTTATCTGACTTTGAATTCTAATGAGTATCATGATCTCATAATCAAAGTATTCCGGCAGGTATGGCTATATCTGAGCCAAGCTAGTTTGGGTATTAAATCAGATAAGCAATGTTGTTGCTATGATTAA 1188 0.3864 MKWGGRKPSSSSSSPSPTSKPSFISHVSPFSWLSKFKQMRINSEPKPGKLKQNAKQNSPCDSSPQYACGNRGRFYGGDDDAFWRLSFSEEVNEHKKNEDILKPVVYNLDAEHVIPSSSVRLNAKRHGRRERERERERESTQKDIGLREERKLVNETKSAKELECLKRRYERKAQRVLQEQLLNLEKAEEEAEFASSKFLEKDELQFASPRTICTPRKHLFPSSLDAKISGLGSIREGSVSEELKGKFNKQRKSLHVSRELQRRKPKHSSKVRVYSPRMASKVEICRIKAKEEKKKAKLKMKKEEEIVEENVGLDHFAVVKCSLDPQQDFRDSMIEMITEKQISKPEEMEELLACYLTLNSNEYHDLIIKVFRQVWLYLSQASLGIKSDKQCCCYD. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06091 395 Coils Coil 152 197 - -
Seca11g06091 395 Pfam Transcriptional repressor, ovate 322 378 IPR006458 -
Seca11g06091 395 MobiDBLite consensus disorder prediction 49 65 - -
Seca11g06091 395 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 153 379 IPR038933 GO:0045892
Seca11g06091 395 NCBIfam uncharacterized plant-specific domain TIGR01568 317 379 IPR006458 -
Seca11g06091 395 ProSiteProfiles OVATE domain profile. 318 377 IPR006458 -
Seca11g06091 395 MobiDBLite consensus disorder prediction 123 143 - -
Seca11g06091 395 MobiDBLite consensus disorder prediction 1 25 - -
Seca11g06091 395 MobiDBLite consensus disorder prediction 120 143 - -
Seca11g06091 395 Coils Coil 286 308 - -
Seca11g06091 395 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06091 Seca-Chr11 161339440 161340627 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca11g06091 Ovate 9.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06091 - - aprc:113859996 489.189