Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06082 ATGGGAAGCCAAGAGGTGAAACTTGTGAGCTTTTGGGCGAGTCCTTTTGGTAAAAGGGTTGAGTGGGCCATGAAACTCAAGGGTATTGAGTTTGAGTACATAGAAGAAGATATCTTCAACAAGAGTAGTCTCCTTTTAGAGTTGAACCCAGTTCACAAGAAGGTGCCTGTTCTTGTCCATGCCCAGAAACCCATAGCTGAGTCATTCATCATCCTTGAATACATTGATGAAACATGGAACAACCAATTTCCACTTTTGCCTCACAATCCTTATCAAAGAGCTCTTGCTCGCTTTTGGGCTAATTTTGGTGAACAAAAAGTACTTTTGGATGCAGCATGGATTGCAATGTGTAGCAGCGGGGATGAACAGGAAAAGGCTGTGAATGTAGCCAAAGAAGCAATGGAGAAAATAGAAGAGGAGATTAAGGGGAAGAAATTCTTTGGAGGGAACAATATTGGGTACCTTGACCTTGCACTTGGATGGATTTCTTATTGGATTCCTGTTTGGGAGGAAGTTGGGTCTATGCAAATAATAGACCAATTGAAATTTCCAGCCACCACTACATGGATGACCAATTTTCTCAGCCACCCTGTGATCAAGGACAACTTGCCCCCAAGAGACAAGATGCTTGTTTACTACCACAGTCGCAGAGAGGCATTGTCTTCAAGTTTTCATGGCTGGTTCAAGGTCTAG 693 0.43 MGSQEVKLVSFWASPFGKRVEWAMKLKGIEFEYIEEDIFNKSSLLLELNPVHKKVPVLVHAQKPIAESFIILEYIDETWNNQFPLLPHNPYQRALARFWANFGEQKVLLDAAWIAMCSSGDEQEKAVNVAKEAMEKIEEEIKGKKFFGGNNIGYLDLALGWISYWIPVWEEVGSMQIIDQLKFPATTTWMTNFLSHPVIKDNLPPRDKMLVYYHSRREALSSSFHGWFKV. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06082 230 Gene3D - 89 224 - -
Seca11g06082 230 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Seca11g06082 230 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Seca11g06082 230 Gene3D Glutaredoxin 2 88 - -
Seca11g06082 230 Coils Coil 120 140 - -
Seca11g06082 230 Pfam Glutathione S-transferase, C-terminal domain 109 197 IPR004046 -
Seca11g06082 230 SFLD Main (cytGST) 2 222 - -
Seca11g06082 230 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Seca11g06082 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 219 IPR010987 -
Seca11g06082 230 CDD GST_N_Tau 6 79 - -
Seca11g06082 230 FunFam Tau class glutathione S-transferase 1 88 - -
Seca11g06082 230 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Seca11g06082 230 SUPERFAMILY GST C-terminal domain-like 77 218 IPR036282 -
Seca11g06082 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 209 IPR045073 -
Seca11g06082 230 FunFam Tau class glutathione S-transferase 86 223 - -
Seca11g06082 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06082 Seca-Chr11 161282480 161283748 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06082 2 221 Glutathione S-transferase Gene Family AT2G29420 43.636 6.77e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06082 K00799 - tpra:123914566 378.637