Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06079 ATGATGGGAAGCCAAGAAGTGAAGCTGCTGAACATTTTGATGAGTCCAATGTGTCGCAGGGTTGAATGGGCTCTAAAACTCAAAGGTGTTGATTATGAGAACATAGAAGAAGATATCTTCAACTTAAGCACTCTCCTTAAGGAATTGAACCCGGTTCACAAGAAGGCTCCGGTTCTTGTTCATCGTCAGAAACCGATCGCTGAGTCACTCATCATCCTTGAATACATCGATGAAACATGGAACCAATATCCTTTGATGCCTCACCATCCTCATCAAAGAGCTCTTGCTCGCTTTTGGGCTAACTTAGCTGATGACAAGCTTGCGAAGGGTTCATGGGTTGCAATAATGCGTAGCAGTGGGGATGAACAGGAAAAGAGAGTGAAGGAAGTAAGAGAAGTAATGGAGAAGCTAGAAGAAGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTACCTTGACCTTGTACTTGGATGGATCACTTGTTGGCTTCCTATTTGGGAGGAAGTTGGGTGTATTCAAGTACTTGACCCATTGAAATGTCCATCCATTGCTGCTTGGAAGACCAATTTTCTGAACCACCCTGTCATCAAGGACTGCTTACCACAAAGGGACAAGATGCTTGTTTATTGCCATCGTCGCTTAGAACAGTATTCTTCTAGTACTGGTCATGCCTGCAAGATCATGGGAAGCCAAGAGGTGAAGCTTGTGAGCTTTTGGGTGAGTCCTTTTGCTAAAAGGGTTGAGTGGGCCTTGAAACTCAAGGGTATTGATTTTGAGTATATAGAAGAAGATGTCTTCAACAAAAGTAGTCTCCTTTTGGAGTTGAACCCGGTTCACAAGAAGGTGCCAGTTCTTGTCCATGCCCAGAAATCCATTGCTGAGTCATTCATTATCCTTGAATACATTGATGAAACATGGAACCAATATCCACTTTTGCCTCACCATCCTTATCAAAGAGCTCTTGCTCGCTTTTGGGCTAATTTTGGTGAACAAATTCTTTTGAGTCAAGTATCGATTGCAATGTGTGGCAGCGGGGATGAAAAGGAAAAGGCTGTGAGTGGAGCCAAAGAAGCAATGGAGAAAATAGAAGAGGAGATTAAGGGGAAGAAATTCTTTGGAGGGGACAATATTGGGTACCTTGACCTTGCACTTGGATGGATTTCTTATTTGATTCCTGTTTTGGAGGAAGTTGGGTTTATGCAAATAATAGACCCATCGACATACCCAGCAATCACTACTTGGATGACCAATTTTCTCAACCACCCTGTGATCAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTTCAAGGTTTCATGGCTGGTTTAATAAGGTCTAGATCCATGTCATAA 1368 0.4291 MMGSQEVKLLNILMSPMCRRVEWALKLKGVDYENIEEDIFNLSTLLKELNPVHKKAPVLVHRQKPIAESLIILEYIDETWNQYPLMPHHPHQRALARFWANLADDKLAKGSWVAIMRSSGDEQEKRVKEVREVMEKLEEEIKGKKFFGGDNIGYLDLVLGWITCWLPIWEEVGCIQVLDPLKCPSIAAWKTNFLNHPVIKDCLPQRDKMLVYCHRRLEQYSSSTGHACKIMGSQEVKLVSFWVSPFAKRVEWALKLKGIDFEYIEEDVFNKSSLLLELNPVHKKVPVLVHAQKSIAESFIILEYIDETWNQYPLLPHHPYQRALARFWANFGEQILLSQVSIAMCGSGDEKEKAVSGAKEAMEKIEEEIKGKKFFGGDNIGYLDLALGWISYLIPVLEEVGFMQIIDPSTYPAITTWMTNFLNHPVIKDSLPPRDKMLVYFQGFMAGLIRSRSMS. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06079 455 CDD GST_C_Tau 319 444 IPR045074 GO:0004364|GO:0006749
Seca11g06079 455 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 234 313 IPR004045 -
Seca11g06079 455 FunFam Tau class glutathione S-transferase 315 451 - -
Seca11g06079 455 SFLD Glutathione Transferase (cytosolic) 3 223 IPR040079 -
Seca11g06079 455 Pfam Glutathione S-transferase, C-terminal domain 349 425 IPR004046 -
Seca11g06079 455 Pfam Glutathione S-transferase, C-terminal domain 114 197 IPR004046 -
Seca11g06079 455 Coils Coil 120 140 - -
Seca11g06079 455 Pfam Glutathione S-transferase, N-terminal domain 235 307 IPR004045 -
Seca11g06079 455 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Seca11g06079 455 SUPERFAMILY Thioredoxin-like 235 335 IPR036249 -
Seca11g06079 455 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Seca11g06079 455 FunFam Tau class glutathione S-transferase 86 223 - -
Seca11g06079 455 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Seca11g06079 455 SFLD Main.3: Omega- and Tau-like 3 223 IPR045073 -
Seca11g06079 455 SFLD Main.3: Omega- and Tau-like 232 447 IPR045073 -
Seca11g06079 455 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 210 IPR010987 -
Seca11g06079 455 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca11g06079 455 SFLD Main (cytGST) 232 447 - -
Seca11g06079 455 CDD GST_N_Tau 236 309 - -
Seca11g06079 455 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 240 437 IPR045073 -
Seca11g06079 455 Gene3D - 315 448 - -
Seca11g06079 455 Gene3D - 86 224 - -
Seca11g06079 455 FunFam Tau class glutathione S-transferase 231 317 - -
Seca11g06079 455 Coils Coil 348 368 - -
Seca11g06079 455 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 318 441 IPR010987 -
Seca11g06079 455 CDD GST_N_Tau 7 80 - -
Seca11g06079 455 SUPERFAMILY GST C-terminal domain-like 307 445 IPR036282 -
Seca11g06079 455 SUPERFAMILY Thioredoxin-like 7 107 IPR036249 -
Seca11g06079 455 Gene3D Glutaredoxin 230 314 - -
Seca11g06079 455 Gene3D Glutaredoxin 2 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06079 Seca-Chr11 161261228 161269439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06079 232 448 Glutathione S-transferase Gene Family AT2G29420 42.661 1.58e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06079 K00799 - tpra:123914566 642.114