Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06072 ATGGAGAGTACTAAATTCAGCAACCGATATATGAATGAACAAGACGACACTGACATAGCTCAAGAAAACATTGCCGACTCCCCTCCTTCTTCCACGGCGTTTAACATCGATGGCTTGGTCACTTCCCCCACTTCTTCAGCTAAGAGAAGTAAATTAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGGTCAAGGCTAAAAGGAGAGAACAATACCCCACCTTCCGATTCATGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAAGGTTCTCCTTATCCCAGAGGTTACTACAGATGTAGCAGTTCCAAAGGTTGTCCGGCAAGGAAACAAGTGGAGAGGAGCCGCGTGGACCCCACTATGCTCGTCGTAACCTACTCTTCCGAACATAACCACCCATGGCCAGTTTCCAGAAACCATCACTCCAGACCCAGCACAACAGCCAAGAAGCCCGAACCGGAACCGGTCGAACCGGAGGAGGAAGAGGAAGAGGAGAAGTTTGGGGATCAACTAGGAGGAGGAGGGGATGAGCTGTTAGGGTGGTTGGGGGAAATGGAAACGACGTCGTCTGCCGTCCTCGAAAGCCCCATTATGGCGGGATACGATGCTGACGTGGCGTCCATGTTCATGCCCATGAGGGAAGAGGATGAGTTGCTTTTCGCTGACCTCGGGGAGCTGCCGGAGTGCTCCACGGTGTTCCGGCAGGGGATGCTTGACGACCGGCGGCGGTTCACGGCGCCGTGGTGTGGGACCACAAGTTGA 786 0.5344 MESTKFSNRYMNEQDDTDIAQENIADSPPSSTAFNIDGLVTSPTSSAKRSKLSRRAIQKRVVQIPMKETEGSRLKGENNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSSEHNHPWPVSRNHHSRPSTTAKKPEPEPVEPEEEEEEEKFGDQLGGGGDELLGWLGEMETTSSAVLESPIMAGYDADVASMFMPMREEDELLFADLGELPECSTVFRQGMLDDRRRFTAPWCGTTS. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06072 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 239 IPR044810 GO:0003700
Seca11g06072 261 Gene3D WRKY domain 72 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06072 261 MobiDBLite consensus disorder prediction 138 185 - -
Seca11g06072 261 FunFam WRKY transcription factor 65 60 143 - -
Seca11g06072 261 Pfam WRKY DNA -binding domain 84 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06072 261 MobiDBLite consensus disorder prediction 1 123 - -
Seca11g06072 261 SUPERFAMILY WRKY DNA-binding domain 79 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g06072 261 ProSiteProfiles WRKY domain profile. 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06072 261 SMART WRKY_cls 82 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g06072 261 MobiDBLite consensus disorder prediction 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06072 Seca-Chr11 161195321 161197069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06072 15 243 WRKY Transcription Factor Family AT1G29280 56.198 2.91e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g06072 WRKY 9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06072 - - gmx:100793777 367.466