Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g06046 ATGGCGTCCACCAGAGAACGTGAAAACTTCGTCTACATCGCCAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTAAATGTTGAGTTGACTGTTGAGGAGCGAAACCTTCTTTCGGTCGGTTACAAGAATGTAGTGGGTGCTCGTAGGGCTTCATGGAGGATTCTATCCTCAATTGAGCAGAAGGAAGAAGCTAAAGGGAACGATGTGAGTGTGAAACGGATAAAGGAGTATAGGCAGAAGGTGGAATCTGAATTGTCCAATATATGCAATGATATCATGACTGTTATTGATGAGCACCTTATTCCCTCAAGCACTACTGGTGAACCTAGTGTGTTTTTCTATAAAATGAAAGGGGACTATTATCGCTATCTGGCAGAATTCAAATATGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCATATCAGACGGCTTCCACTACAGCAGAGGCTGAGTTACCTCCTACTCATCCCATTCGATTGGGTTTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATCTTAAACTCTCCTGAAAGGGCATGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGCTGGATACTCTAAGTGAGGAGTCCTATAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCTGAGGAACAAAAGGTGGAGTCTACCCGAGCAGCTGGAGATGAAGATGAATAG 780 0.4436 MASTRERENFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRQKVESELSNICNDIMTVIDEHLIPSSTTGEPSVFFYKMKGDYYRYLAEFKYGDERKEAADHSMKAYQTASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVESTRAAGDEDE. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g06046 259 PIRSF 14-3-3 1 248 IPR000308 -
Seca11g06046 259 Coils Coil 13 33 - -
Seca11g06046 259 Gene3D - 1 250 IPR036815 -
Seca11g06046 259 SMART 1433_4 7 248 IPR023410 -
Seca11g06046 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Seca11g06046 259 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Seca11g06046 259 Pfam 14-3-3 protein 14 235 IPR023410 -
Seca11g06046 259 FunFam 14-3-3 protein epsilon 2 248 - -
Seca11g06046 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca11g06046 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Seca11g06046 259 MobiDBLite consensus disorder prediction 237 259 - -
Seca11g06046 259 MobiDBLite consensus disorder prediction 240 259 - -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Seca11g06046 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g06046 Seca-Chr11 160739380 160743449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g06046 1 245 14-3-3 family AT2G42590 81.224 1.03e-152 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g06046 K06630 - gmx:100807980 483.411