Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05984 ATGCCCTTGGTACCTGCCAACACCAAAATTGAGGCTCCTAAACCTTCTCTTACCCCCGAAGAGATAAAGGCCAAACAACAGGAACTAAGGTATGAAACTGAATGTCAGATAAGATTCACATTATGGGCCATGAGAGAATTCGAATTGGTAAGGAGTTGCTGGAAGCCAAGAGGATTGAAGAAGAGAATGAGAGAAAACGGTCTGGTTTACCTAGTTGTCTCACATCTTGTGTTGTATTTTGAATGCACCCAGCTACAAGAAAAATCTGCTTCCTTTTGCAGGTTGTTGGCTTTGAGAAAAGCAGAGAAAGAGGAAGAGAAAAGGGCTAGAGAGAAGATCAGGCAAAAGTTGGAAGAAGACAAGGCAGAAAGAAGGCGAAGACTTGGATTGCCTCCAGAGGAGCCTTCAGAAGCCAAACCTTCAACTGTTGTAGAGGAGAAGAAGAGTTTTCTGCCAGTTAGGCCTGCCACAAAAGCTGAGCAGATGAGAGAGTGTTTGCGTTCTCTCAAGCAGAACCACAAGGAGGATGATGCCAGAGTAAAGAGAGCATTCCAAACTCTTCTAACCTACGTGGGGAATGTTGCCAGAAATCCCAGTGAAGAAAAATTCAGGAAGATTCGTCTTAGTAACCAAACTTTTCAGGAAAGAGTTGGTGCCTTGAAAGGGGGCATTGAGTTCCTGGAAATTTGCGGCTTTGAGAAGATCGAAGGTGGTGAGTTTTTGTTTTTGCCTAGGGACAAGGTTGAGATGGCAGTCCTGAATTCAGCTGGATCTGAGCTGGACTCTGCAATAAAGAATCCATTTTTTGGAGTTCTTTAG 819 0.4408 MPLVPANTKIEAPKPSLTPEEIKAKQQELRYETECQIRFTLWAMREFELVRSCWKPRGLKKRMRENGLVYLVVSHLVLYFECTQLQEKSASFCRLLALRKAEKEEEKRAREKIRQKLEEDKAERRRRLGLPPEEPSEAKPSTVVEEKKSFLPVRPATKAEQMRECLRSLKQNHKEDDARVKRAFQTLLTYVGNVARNPSEEKFRKIRLSNQTFQERVGALKGGIEFLEICGFEKIEGGEFLFLPRDKVEMAVLNSAGSELDSAIKNPFFGVL. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05984 272 SUPERFAMILY PUG domain-like 154 268 IPR036339 -
Seca11g05984 272 MobiDBLite consensus disorder prediction 121 144 - -
Seca11g05984 272 Coils Coil 99 123 - -
Seca11g05984 272 PANTHER F13M7.16 PROTEIN 94 272 - -
Seca11g05984 272 SMART PGNneu 182 245 - -
Seca11g05984 272 Coils Coil 271 272 - -
Seca11g05984 272 MobiDBLite consensus disorder prediction 121 145 - -
Seca11g05984 272 Pfam PUB domain 179 249 IPR018997 -
Seca11g05984 272 CDD PUB_UBA_plant 166 272 - -
Seca11g05984 272 Gene3D - 146 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05984 Seca-Chr11 160158255 160165950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05984 1 272 C2H2 Transcription Factor Family AT1G04850 63.177 7.40e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05984 K24348 - gmx:100779218 339.347