Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05978 ATGAAGGCAGATTTTTCCATGGCATATTCATCAGCATCAATTCTGGTTGTTGGTTTCTTCATTGTCTATACCCACCTCATCAAAATGACAGCATGCACAATAACTGCCCTCTTTTGCAAGATCCCCTTGAAAGATGCCTTGGTTCTTGGCCTCATTTTGAACTGCAAAGGTGTAGTGGATGTTGGCCTCTTCAATAGCTTATATGATGAAAAGGCTATTTCATCCCAAACTTATGGAGTGATGGTAGTCAGCATAATGATCATAGCATGCATAGTGAAATGGTCTGTGAAGATTTTGTATGATCCATCAAGAAAATATGCTGGCTACCAGAAAAGAAACATCATGAATTTAAAACCAGACTCAGACCTGAGAATAGTTGCTTGCCTTCATAAACAAAACAATATAACTGCTATAACAGATGTCCTTGACCTTTGTTCTCCAGCAACAGAACACCCCATCATTGTGGATGTATTGCATCTAATAGAGCTAGTTGGGAGGACCACTCCCATTTTCATTTCCCATCGTCTTCAAAGAACAGTTTCAGGTGCCCACAAGTCTTATTCAGATGATGTCATTCTTGCTTTTGACCTCTTTGAACATGACAACCGTGGTGCAGCAACTGCACACATCTACACAGCCATATCTCCACCATCCCTGATGCATGAAGATGTTTGTCAACTTGCATTGGACAAAGTTGCATCCATCATAATTCTTCCATTCCATCAAAGATGGTCCATTGATGGTGGCATTGAATCTGATGACAAGAACATAAGGTCCTTAAATTGTAAAGTCCTAGAAGTGGCTCCATGCTCAGTAGGAATACTTGTGAGCCGTTTTTCCTTACAAAATAACTCATTCATTCAGTTAGCCATGGTTTATTTGGGTGGAAAAGATGACAGAGAAGCTTTGTGCTTAGCTAAAAGAGCTGTAAGGAATCCAAGGATCAACTTGGTTGTGTACCACCTTACTCCTGAGGAACAGGTACCAAACATGGAGTATATACTAGATAATGAGGCTCTACATGAACTTAAGAATCCACATAATGGCTTGGATAATGTAAGTTACCAAAGAATTGCAGTAAATGATGGACCAGAGACATCTGCTATTCTCCGTGACTTAGCATATCAGCATGACTTTTTCATAGTTGGGAGGAGACATGGCTTAGAATCACCTCAGACAGAAGGACTTACAAATTGGAGTGAATTTTCAGAGTTAGGTGTCATTGGTGATTTGCTTGCTTCTCCAGATTTTGAGAGCCGAGCAGGTGTTTTGGTAGTGCAGCAACAAGTCAAAGATTAG 1299 0.4034 MKADFSMAYSSASILVVGFFIVYTHLIKMTACTITALFCKIPLKDALVLGLILNCKGVVDVGLFNSLYDEKAISSQTYGVMVVSIMIIACIVKWSVKILYDPSRKYAGYQKRNIMNLKPDSDLRIVACLHKQNNITAITDVLDLCSPATEHPIIVDVLHLIELVGRTTPIFISHRLQRTVSGAHKSYSDDVILAFDLFEHDNRGAATAHIYTAISPPSLMHEDVCQLALDKVASIIILPFHQRWSIDGGIESDDKNIRSLNCKVLEVAPCSVGILVSRFSLQNNSFIQLAMVYLGGKDDREALCLAKRAVRNPRINLVVYHLTPEEQVPNMEYILDNEALHELKNPHNGLDNVSYQRIAVNDGPETSAILRDLAYQHDFFIVGRRHGLESPQTEGLTNWSEFSELGVIGDLLASPDFESRAGVLVVQQQVKD. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05978 432 Gene3D - 1 107 IPR038770 -
Seca11g05978 432 PANTHER CATION/H + ANTIPORTER 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05978 Seca-Chr11 160082491 160084202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05978 21 429 Antiporter Super Family AT5G22900 42.558 2.01e-113 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05978 K26731 - gmx:100797995 636.336