Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05946 ATGGATATTGATTCAAGAAACTGGAGATGTGGAATAAAGGCCCAATTGCTTGTAACTTCTGTTCTTCTTTTACTGCAAAACTTTCTGGTCATCTCTGAGGTATTTGCAGAGGCAACAAGCTCTGTACATATTGTATACATGGGAGATAAGATATATCCTAATCCAGAAACTACTAAAAAGTATCACCACAAAATGTTATCTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCAATTCTTTACAGCTATAAGCATGGATTTTCAGGGTTTGCTGCAAGATTGACAAAATCTCAAGCAAAAGAAATAGAAAATTTTCCTGGGGTAGTTTCTGTCATTCCAAATAGAATTCATAAACTCCACACAACCAGAAGCTGGGACTTTTTAGGGATCCATCACTATCATTCCTCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTGAAGGAACCATCATAGGTGTCATAGACACAGGCATTTGGCCAGAATCTGCAAGTTTTAATGATGAAGCAATGGGACAAATCCCACCAAGGTGGAAAGGAGTTTGTCAAGTGGGAGAGCACTTCAACACCACCAATTGCAACAAGAAGATAATAGGTGCTAGATGGTTCATGAAAGGAATGAATGATCATACCAAGAATCTCATCCATGGAAAAGACACTAAGGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGCACTCATACAGCTTCAACAGCAGCTGGTTATTTTGTAGGAAATGCAAATTATAAAGGACTTGCTTCTGGTATAGCCAGAGGAGGAGCACCACTGGCTCACATAGCTATCTACAAGGCTTGCTGGGACATTTCAGTTGGAGATTGCACTGATGCTGATATACTGAAAGCTTTTGACAAGGCTATACATGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCTTTGGCATTCCTTTGTTTTCCTATGTTGATCAACGTGACACAATGGCAATTGGTTCATTTCATGCAACTGCCAAGGGAATCACAGTTGTTTGTTCAGCTGGAAATTCTGGTCCAGGGTCTCAAACCATTACAAACACTGCACCATGGATCATTACAGTTGCAGCTACCACAATAGATAGAGCCTTTCCAGCAGCCATTACCCTTGGAAATAACAACACTGTGTGGGGACAGTCCATTGATACTGCAAAACATAATCTTGGATATGTTGGTCTCACATACTCTGAACGCATTGCTCTAGACCCATCAGATGATTTAGCGTGA 1245 0.4048 MDIDSRNWRCGIKAQLLVTSVLLLLQNFLVISEVFAEATSSVHIVYMGDKIYPNPETTKKYHHKMLSSLLGSKEAAKNSILYSYKHGFSGFAARLTKSQAKEIENFPGVVSVIPNRIHKLHTTRSWDFLGIHHYHSSSSKTVFTESNLGEGTIIGVIDTGIWPESASFNDEAMGQIPPRWKGVCQVGEHFNTTNCNKKIIGARWFMKGMNDHTKNLIHGKDTKEYLSARDAIGHGTHTASTAAGYFVGNANYKGLASGIARGGAPLAHIAIYKACWDISVGDCTDADILKAFDKAIHDGVDVLTVSLGFGIPLFSYVDQRDTMAIGSFHATAKGITVVCSAGNSGPGSQTITNTAPWIITVAATTIDRAFPAAITLGNNNTVWGQSIDTAKHNLGYVGLTYSERIALDPSDDLA. 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05946 414 CDD Peptidases_S8_3 118 366 IPR034197 -
Seca11g05946 414 ProSiteProfiles Serine proteases, subtilase domain profile. 125 414 - -
Seca11g05946 414 FunFam Subtilisin-like protease SBT5.3 31 121 - -
Seca11g05946 414 Pfam Subtilase family 149 365 IPR000209 GO:0006508|GO:0008236
Seca11g05946 414 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 391 IPR045051 -
Seca11g05946 414 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 121 IPR037045 -
Seca11g05946 414 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Seca11g05946 414 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Seca11g05946 414 Gene3D - 367 404 - -
Seca11g05946 414 Pfam Peptidase inhibitor I9 42 121 IPR010259 -
Seca11g05946 414 Gene3D Peptidase S8/S53 domain 151 366 IPR036852 GO:0004252|GO:0006508
Seca11g05946 414 SUPERFAMILY Subtilisin-like 120 391 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05946 Seca-Chr11 159753935 159757955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05946 36 403 Subtilisin-like Serine Gene Family AT1G32960 54.987 4.33e-142 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05946 - - lja:Lj4g3v2578300.1 718.383