Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05912 ATGTCAAGGGAGGACTTGAGGAAATGGTTTCTTTCTATGGAATCTGCACTCTTTCGCTACCGTTTTCGTCGTCTAACTGCTGAAGCTCAGAGGGTAATCTTGGACGAATTTGACCTTCCATACAGGGCTGTTAGCAATATGGAATTTGAGAGCATAAAAGAGAAATTGGGGCAAGTTGCTCGTTCCATGGGCCAGCAATCACCACCCACTGCTGATTCTATCTTCTACAAGGTACCATTTGAAGAAGTTCCAGAGCTTGTAGCTGGACGGAGAGTGTTTATAAATCAAGGATATGCATATGTTGCAATGCATCAGGTTGTTTCACTTATCGCCACACTATTTCGCAGTCAACTGTCAAAGGCACTTATCCTTACAAACAGAAAATGGACATCTTCAATTAGAGAACAAGAGAAACATAGGTTAACTCCTATTGTGGAAGCCTTGTGCTCAAGTTATCTGGGTCCTGATTTTTCTCAGCCGAGAGAATATGCTGAGATATCATTGAAGGACATTGATCAAGTTGCCAAGAGCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAGAGAAGATCATCATTTAAAGCACGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAACCTGGATGATGCACTTGCGTTTTGGAGAGCTGAGTTCTCTAAAAAGGTTGGTTTGGAGAAGTTCGAGAAAGAATATGCATATAACATACGCCATAATTATGGAAAGGAAGGGAAGAGAACTGATTATACTCCCTATTCTTGTCAAAAGATTATTTCATCAACCCCTGGTGCTGGAGATCAGCATGGTTGCCCCTATCGACATTTCAGTGAAGAGAATCTAAGAGCCGCTCTCAGCAGAATGGGGGTGAACAGTCGAGCAATGGAAGATGTAATGGACAAAGTGAGAAATAGACATTATCAGTTAGCTTGTACCTTGACATTTGAAGCTCTTCACAGCATGCCATGTGATGCAGGGATTAACCATCCAAATCAGTACTTCAGTGACAGTCAGAAGATATTGCAGCCAAAGAAGGATTCTTCAGCCTAA 1068 0.4251 MSREDLRKWFLSMESALFRYRFRRLTAEAQRVILDEFDLPYRAVSNMEFESIKEKLGQVARSMGQQSPPTADSIFYKVPFEEVPELVAGRRVFINQGYAYVAMHQVVSLIATLFRSQLSKALILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDFSQPREYAEISLKDIDQVAKSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKEYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDQHGCPYRHFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTLTFEALHSMPCDAGINHPNQYFSDSQKILQPKKDSSA. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05912 355 Pfam Eukaryotic and archaeal DNA primase, large subunit 75 340 IPR007238 GO:0006269
Seca11g05912 355 Gene3D - 1 148 - -
Seca11g05912 355 CDD PriL_PriS_Eukaryotic 4 343 IPR016558 -
Seca11g05912 355 PANTHER DNA PRIMASE LARGE SUBUNIT 3 351 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05912 Seca-Chr11 159451914 159458567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05912 4 350 Core DNA Replication Machinery Family AT1G67320 68.586 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05912 K02685 - gmx:100806321 664.07