Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05884 ATGAAGCCCACGGCAACATTCCTAATCCCAACACTTCTTTGTCTTGCTCTTGGAACAATATTTCAAACCTCTTGGCCATTTAGAACTCTCTTTATCTCCACTTTCCTCACCCTCTTCACTCTTTCCCTGAACTACTGGCTTATCCCCGGAGGTTTTGCATGGAGGAATTACAAAAAGCAAACCACAAAACTCACGGGCCCAATAGGATGGCCCATATTAGGAACCTTACCTTATATGGGCTTTTTGGCCCATTCAAAACTCGCTGCCATAGCCACTTCGTTAAACACGAAGAGGCTTATGGTAATGAGTTTAGGATCCACTCCTGTTATTATTAGCAGTCACCCTGAGACTGCTAAAGAGATTCTATTTGGTTCATCATTCTCTGATCGACCAATTAAAGAATCGGCACGCTTGCTATTGTTTGAGCGTGCCATTGGTTTCGCTCCTTCTGGAACCTATTGGCGCCATCTAAGAAGGATTGCGGCGTTTCACATGTTTTCTCCGAGGAGGATTCAGTGCTTGGAGAGCCTACGGCAACGTGTGGTTGATGAGATGGTGGTGAGGACATGGAACGTGATGGAGGAGAAAGGGGTGGTGGAAGTTAGAGGGATATTTCAAGAAGGGTCACTTAGTAATATTTTGGAGAGTGTGTTTGGTCGTTTGGGTTCTCAAGGTGAGGAGTTGGGGGAAATGGTTAAGGAAGGGTATGAGTTGATTTCGGAGTTTAATTTGGAGGATTATTTTCCTTTGAAGTTTTTGGATTTTCATGGGGTGAAGAGAAGGTGTCATAAATTGGCGGGTAAGGTTACTAATTTGGTTGGTCGAATTGTGGAAGAAAGAAAAAGAGGTGAGGTGGAGTTGGTTGGGAAGAATGATTTTCTTACCACTTTGTTGTCCTTGCCTAAAGAGGAAAGATTGGGTGATTCAGATATGGTGGCTATTCTGTGGGAAATGATATTTAGAGGAACAGACACAGTTGCTATACTCCTGGAATGGATAATGGCGAGGATGGTTTTACACCAAGATATACAAATGAAAGCCCGCCAAGAGATTGACACGTGCATAGGCCAAAACGGTCACGTGCGAGACTCGGACATTCCAAATCTCCCTTACCTCCAGGCCATAGTAAAGGAGGTTCTCCGGCTACACCCACCAGGCCCATTGCTATCCTGGGCCCGCCTCGCAGTCCATGATGTCCACGTGGATAAAGTCCTTGTGCCAGCTGGTACAACAGCAATGGTTAACATGTGGGCCATATCTCATGACTCCTCTATATGGGAAGACCCATGGGCTTTTAAGCCCGAGAGGTTTCTCAAGGAAGACGTGTCTATCATGGGATCAGATTTGAGGCTTGCACCGTTCGGTGCAGGACGTAGGGTATGCCCGGGTAGAGCCTTGGGCTTAGCTACGGTCAATCTCTGGCTCGCACAACTTCTTCATAACTTCATATGGCTTCCAGCACAACCCGTGGATCTTTCAGAATGCCTTAGGCTTTCTCTTGAAATGAAGACACCTCTGAGATGTCTTGTGGTTCGTAGATAA 1542 0.4604 MKPTATFLIPTLLCLALGTIFQTSWPFRTLFISTFLTLFTLSLNYWLIPGGFAWRNYKKQTTKLTGPIGWPILGTLPYMGFLAHSKLAAIATSLNTKRLMVMSLGSTPVIISSHPETAKEILFGSSFSDRPIKESARLLLFERAIGFAPSGTYWRHLRRIAAFHMFSPRRIQCLESLRQRVVDEMVVRTWNVMEEKGVVEVRGIFQEGSLSNILESVFGRLGSQGEELGEMVKEGYELISEFNLEDYFPLKFLDFHGVKRRCHKLAGKVTNLVGRIVEERKRGEVELVGKNDFLTTLLSLPKEERLGDSDMVAILWEMIFRGTDTVAILLEWIMARMVLHQDIQMKARQEIDTCIGQNGHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVLVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATVNLWLAQLLHNFIWLPAQPVDLSECLRLSLEMKTPLRCLVVRR. 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05884 513 SUPERFAMILY Cytochrome P450 66 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 Gene3D Cytochrome P450 53 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 Pfam Cytochrome P450 66 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 FunFam Cytochrome P450 78A5 56 513 - -
Seca11g05884 513 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05884 513 CDD CYP78 95 506 - -
Seca11g05884 513 PANTHER CYTOCHROME P450 78A7-RELATED 26 513 - -
Seca11g05884 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05884 Seca-Chr11 159143610 159145782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05884 24 513 Cytochrome P450 AT1G74110 51.145 8.33e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05884 - - gmx:100817944 830.091