Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05883 ATGGAGGGCTCAACATCCAAGAACATCCTCCAAAGTCCAGCACTTCTTCAGTACATCCTTGAAACGAGTGGGTATCCGAAAGAGCACGAGCAATTGAAGCAACTCAGAGAGAAAACCGTGCAGAAATACGGGAAAAAGAGCAGGAGTGTGATGAATGTGCCGGTGGATGAGGCACAGTTCATATCTATTCTTCTAAAAGTGATGAACGCGAAGAAAACACTTGAAATTGGAGTCTTCACTGGTTATTCTCTTCTTGCTACAGCTCTTGCTCTTCCTCCTGATGGCAAGGTAACAGCAATTGATGTGGATAGAGAAGCGTACGAGACTGGATTGCCCTTCATTCAGAATGCAGGAGTCGAGCACAAAATTAACTTTATCCATGGGGATGCATTCTCAGTCATGAATGGTCTTGTTGATGGAAAACATGAAGAATCATTTGATTATGCATTTGTTGACGCGGAGAAGGAAAACTTCATGAAGTATCACGAGCTGTTATTAAAATTGGTGAAGAAGGGTGGAATAATTGCATATGACAACACCTTGTGGTCTGGTTCGGTGGCCATGTCTGAAGACGATGAAATGCCAGATTTTATTATGAAAAAAAGAAAGCATGCACTTGAATTCAACACCTTCATAGCAAATGATACTCGCATAGAATCAACAATCCTTTCTGTTGGGGACGGTGTAACCCTATGCCGACGTCTCTGA 708 0.4251 MEGSTSKNILQSPALLQYILETSGYPKEHEQLKQLREKTVQKYGKKSRSVMNVPVDEAQFISILLKVMNAKKTLEIGVFTGYSLLATALALPPDGKVTAIDVDREAYETGLPFIQNAGVEHKINFIHGDAFSVMNGLVDGKHEESFDYAFVDAEKENFMKYHELLLKLVKKGGIIAYDNTLWSGSVAMSEDDEMPDFIMKKRKHALEFNTFIANDTRIESTILSVGDGVTLCRRL. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05883 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 234 IPR029063 -
Seca11g05883 235 CDD AdoMet_MTases 74 177 - -
Seca11g05883 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Seca11g05883 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 235 IPR002935 GO:0008171
Seca11g05883 235 PANTHER O-METHYLTRANSFERASE-RELATED 2 235 - -
Seca11g05883 235 Pfam O-methyltransferase 21 235 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05883 Seca-Chr11 159107128 159110651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05883 7 235 Monolignol Biosynthesis Gene Families AT1G67990 55.459 1.22e-89 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05883 K00588 K13272 gmx:100813350 343.584