Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05848 ATGGAAATGGAATTAATATCTAGAGAATTTATCAAACCCTCTACACCTACACCTCCTCACCTTACAATCCACCCCTTATCTTTCATAGATCATATCGTTGCTCCTAATTATGTGCCAGTAATTTACTTTTACCCAAACAAGGCATATGACCACCAAGGATCCAAAATTTCAAACCTCAAGAAATCCTTATCCAAAGTCCTATCCATATACTACCCTTTTGCTGGTAGGTTCAAAGATCAAGTTTCAATTGATTGCAACGACCAAGGTGTCTCATTCCTTGTCACAAGGATCAAAACCAACCTATCAGAGATCCTCCACAACCCCACCGAAACAGAGCTGAATCCTCTGTTCCCTGATGAATTGCCATGGAGGGACATGGAATCAAATGCAACCATAGTAGCAATTCAAATCAATTGTTTCAATTGTGGGGGAATGGCTATGAGTGTGTGTATGTCTCACAAAATGGGTGATGCTTCAACTCTTTTTAACTTCATCAATGACTGGGCCAGAATGAACCAAAACCCCAATGAAGAAAAAACAGAGTTACCCTTCTTTGATGCAGGGGATTCTCTGTTCCCACAAAGTGACCTTCCAGTTTTCCCACAAGTTCTGTTTGTGAAACAGAACACAATATGCAAAAGGTTTGTGTTTGAGGGGTCAAAGATTGAGTCCCTTAAGGCCATTGTAACATCTAAAAAAGTGGAAAACCCCACACGTGTTGAAGTTGTCATGGCACTGATTTACAAGCGTGTGGTTTCTGCTTTGGGATTGGATAACAACACACCTTTGAGAATTGCTGCAAATCTCCGCAGAAGAATGGTTCCTCCACTACCTGAAAAATCTGTTGGAAACTGGGTTTTGTCGTTTCCAGTGTCAGGGGAAAAAACAGGGGAAACAGAGTTGAATGAGTTGGTAACCAAAACAAGAGAAGGGTTATCTGAATTTTGTGACAAAACAGTGAAAAACTTTGAGGAAGTTACTGCTTCAAATGATTGTAATAAAAACCAGCAGGTTATGAAGCAGAGTTTGATTTTCTTTGCTAGCTGGTGCAGGCTTCCAGCTTATGAAGTGGATTTTGGGTGGGGTAAGCCAATATGGGTCACTAGTATTGGGTCTCCTGTGAGGAATAGTGTGGTTTTGATGGATACAAAGAGTGGGAATGGGATTGAAGCACTTGTGAACATGGAAGAGCAAGACTTGGGTATATTTGAGTGTGATGTGGAACTCCTTCAATATGCTTCTCTTAATCCAAAAGAGGCAACCATGAAAATGGAACTAATATCTAGAGAAACCATCAAACCCTCTACACCCACCCCTCCTAACCTCACTATCTATCCTCTCTCCTTGATAGATAACATGGTTGCTCCTAATGCTGTGCCATTAGTCTACTTTTACCCAAACCAAAGCTATGAATATGGACCCAAAATATTAGCACTAAAGAATTCCTTATCTAAAGTTCTATCCATATACTACCCTCTCGCAGGTAGATTAAAAGATAAACTTTCCATTGAATGCAATGACCAAGGTGTGTCATTGCTTGTCACAAAGATCAAACTCACGCTATCCGAGTTTATCCAGAACCATAACGAACCATCACTGAACTCTCTATTCCCTGATGAATTGCAATGGAAGGATATGGGTTCAAGTGCGAGTTTAGTGGCCATTCAAATCAACTGTTTTGCATGCGGTGGAATAGCAATCAGTGTCTGTATGTCTCACAAAGTCGGTGACGTTTCCGTTCTATTCAACTTCCTCAATAATTGGGCCCTTTTCAACCGAAAAACTGAAGAACAAGAAGAAGAATTAATAACTACCTTCCCTATATTTGACACAAAAGATTCCCCGTTTCCACAAGGGGACTTGCCAGTTTTACCAGAATTTGTTTTCGTGAAACAGAAAACCGTTACGAGAAGGCTCGTTTTCCGAGGCTCAAAGATTGAGTCTCTCAAGGCTATGGTATCATCCCACAAGGTTGAAAATCCCTCGCGCGTGGAAGTTGTTATAGCACTGATTTACAAGTGTGTTGTTTCTGCGTTGGGATTAACCGCTAACAACACAACTTGGCGCGTGGTTGTCAACCTCCGCAAGAGAATGGTTCCTCCACTACCTGAAAAGTCAGTGGGAAACTTGGTTTTGAGCTTTTTCGCGTCCAACATGGAAAAGAGGGAAATAGAATTGCATGATGTGGTAAGCAGGACGAGAGAAGGGTTATTTGAATTTTGTGAGAAATATGTGAAGAACTTTGGGGATGTGTCATTTGTCTCTGGGTTCCTAAATCGAGCTACTTCTACTTCAACTTCAGTTTCTTCCCCTCAGGAGAAGAAGACTTCGTTGTTTTTTACTAGTTGGTGCAGGTTTCCAATGTATGAGGTGGATTTTGGGTGGGGGAAACCTATATGGGTGACAACTAGTGGCTGTCCCGTTAAGAATAGCATAGTTTTGATGGATACAAGAGATGGGGATGGGATTGAGGCGATTGTGAGTATGGACGAGGAAGACATGGCTAGGTTTGAGCGTGATGTGGAGCTCCTTCAATATGCCTCTCTTAATCCAAACCGCGAGACATGCTAA 2571 0.4162 MEMELISREFIKPSTPTPPHLTIHPLSFIDHIVAPNYVPVIYFYPNKAYDHQGSKISNLKKSLSKVLSIYYPFAGRFKDQVSIDCNDQGVSFLVTRIKTNLSEILHNPTETELNPLFPDELPWRDMESNATIVAIQINCFNCGGMAMSVCMSHKMGDASTLFNFINDWARMNQNPNEEKTELPFFDAGDSLFPQSDLPVFPQVLFVKQNTICKRFVFEGSKIESLKAIVTSKKVENPTRVEVVMALIYKRVVSALGLDNNTPLRIAANLRRRMVPPLPEKSVGNWVLSFPVSGEKTGETELNELVTKTREGLSEFCDKTVKNFEEVTASNDCNKNQQVMKQSLIFFASWCRLPAYEVDFGWGKPIWVTSIGSPVRNSVVLMDTKSGNGIEALVNMEEQDLGIFECDVELLQYASLNPKEATMKMELISRETIKPSTPTPPNLTIYPLSLIDNMVAPNAVPLVYFYPNQSYEYGPKILALKNSLSKVLSIYYPLAGRLKDKLSIECNDQGVSLLVTKIKLTLSEFIQNHNEPSLNSLFPDELQWKDMGSSASLVAIQINCFACGGIAISVCMSHKVGDVSVLFNFLNNWALFNRKTEEQEEELITTFPIFDTKDSPFPQGDLPVLPEFVFVKQKTVTRRLVFRGSKIESLKAMVSSHKVENPSRVEVVIALIYKCVVSALGLTANNTTWRVVVNLRKRMVPPLPEKSVGNLVLSFFASNMEKREIELHDVVSRTREGLFEFCEKYVKNFGDVSFVSGFLNRATSTSTSVSSPQEKKTSLFFTSWCRFPMYEVDFGWGKPIWVTTSGCPVKNSIVLMDTRDGDGIEAIVSMDEEDMARFERDVELLQYASLNPNRETC. 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05848 856 Gene3D - 631 848 IPR023213 -
Seca11g05848 856 Gene3D - 207 414 IPR023213 -
Seca11g05848 856 PANTHER F21J9.9 4 414 - -
Seca11g05848 856 Pfam Transferase family 2 409 - -
Seca11g05848 856 Pfam Transferase family 422 843 - -
Seca11g05848 856 Gene3D - 1 199 IPR023213 -
Seca11g05848 856 Gene3D - 420 622 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05848 Seca-Chr11 158673528 158696316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05848 422 839 Monolignol Biosynthesis Gene Families AT5G48930 25.223 1.05e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05848 - - gmx:100806928 503.442