Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05847 ATGGAACCAATGGAGCTGGAATTGATATCTAGGGAAACCATTAAACCCTCTACACCCACACCTCCTCACCTCAAAATTTACCCTCTCTCTTTCATAGATCACATCGTTTTCCGTAATTACATCCCTTCACTTTTCTTTTACAAGCCCCATGACCAAACATCCAAAATATTAATAGACCTCAAGAAATCATTATCTCAAGTTCTATCCCGATACTACCCTTTTGCAGGAAGGCTCAGGGACCAACTTTCCATAGAATGCAACGACCAAGGTGTCTCATTTCTGGTCGCAAGCATCAAAGGAATAAACCTATCAACAATCCTCCACAACCCAATCGAAGCATCACTGAACCCTTTGTTCCCTGATGAATTGCAATGGAAGGTCATGGATCCAAGTGAAAGCATAGTAGCCATTCAAATCAATTGTTTTCCATGCGGCGGAATAGCAATCAGTGTGTGTATGTGTCACAAAGTCGCAGACGCTGCCACGCTTTTCAACTTCGTCAATGATTGGGCCACAATTAACCGAAAAAAAGAAAAAGAATTATTAGTACTATTACCCTTCCCTTCACTTGATGGAGGAGTTTCATTGTTCCCACAAGAGGACTTGCCTATATACCCCGAAGCAGTGTTTGGGAAAGACAAAACGGTTTGTAGAAGGTTTGTTTTCCAAGCCTCGAAGATCGAGTCCCTCAAGGCCATAGTATCTTCCCACGCGCTGCAAAATCCCACGCGCGTTGAAGTTGTAACTGCCTGGATCTACAAGCGTGCGGTTTCTGCGTTGGGATTGACTTTCAAAACCACGTCGCTTCGGATTGCTGTTAACCTCCGGAAGAGAATGGTTCCTCCGTTGCCTGACACGTGTGTAGGGAACATGGTTTGGTTCTTTTTCGTGTTGAACCCGAGGGAAACCGAACTACATGAGTTGGTAAGCAAAATGAAAGAAGGGTTGTTGGAGTTTTGTGATGTGTTTGTGAAGAAATTTGGAGGGAATAATAAGGACATGTCATTCATCTCCGAGTGTTTGAAACAAGCTACTACTACTACTTCAGATTCGCAAAGTTTGTTTATTTATGCGAGTTGGTGCAGGTTCCCAATGTATGAAGCGGATTTTGGGTGGGGGAAACCTATATGGGTGACAACTAGTGGGTTTCCAGTGAGGAATGGTATAGTTTTGATGGATACAAGAGATGGGAAAGGGATTGAAGCGGTTGTGAGTATGGAAGAGGAAGATATGGCTAGGTTTGAACGTGATGTGGAGCTTCTTCAATTTGCTTCTCTTAATCCGAACCGTGAGACATGTTAA 1302 0.4339 MEPMELELISRETIKPSTPTPPHLKIYPLSFIDHIVFRNYIPSLFFYKPHDQTSKILIDLKKSLSQVLSRYYPFAGRLRDQLSIECNDQGVSFLVASIKGINLSTILHNPIEASLNPLFPDELQWKVMDPSESIVAIQINCFPCGGIAISVCMCHKVADAATLFNFVNDWATINRKKEKELLVLLPFPSLDGGVSLFPQEDLPIYPEAVFGKDKTVCRRFVFQASKIESLKAIVSSHALQNPTRVEVVTAWIYKRAVSALGLTFKTTSLRIAVNLRKRMVPPLPDTCVGNMVWFFFVLNPRETELHELVSKMKEGLLEFCDVFVKKFGGNNKDMSFISECLKQATTTTSDSQSLFIYASWCRFPMYEADFGWGKPIWVTTSGFPVRNGIVLMDTRDGKGIEAVVSMEEEDMARFERDVELLQFASLNPNRETC. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05847 433 Gene3D - 212 424 IPR023213 -
Seca11g05847 433 PANTHER F21J9.9 7 425 - -
Seca11g05847 433 Pfam Transferase family 4 420 - -
Seca11g05847 433 Gene3D - 3 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05847 Seca-Chr11 158662063 158663391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05847 4 416 Monolignol Biosynthesis Gene Families AT5G48930 24.503 4.95e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05847 - - gmx:100806928 612.068