Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05842 ATGGGTTTATGTTCTCTCTTTCTGGTTATACTTCCTCTGTGGACATCATTTGCAATTTGCCAACTTGAAGAATTTGTTAGCATTGACTGTGGAGGGACAAGTAATTACACTGATAGAAACACTGGTTTGGCATGGATTTCAGATTCTGGGATCATGCAACATGGCACTCCAGTGGTAGTAGAAAGTCCAAATGGAAGCATGGTACAATATCAAAATCGTAGAGACTTTTCCATAGACAACAAGAAATATTGTTATACACTAAGCACAGAGGAGAGAAGAAGATACTTAGTGCGTGCAACATTTCAGTATGGAAGCTTGGAAAATGGAGACACATACCCTCAGTTTCAGCTATACTTGGATGCAACCAAATGGACTACTGTGTCAATATATGATGCCTCAAGAATATATGTTAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTTTGCATGTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTCTTGAGTTAAGACCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTAGAAGTAGCTGCAAGAATAAACTTTGGTGCTACTAGTGAGGATGCTGTCAGGTACCCAGATGATCCATATGATAGAATTTGGGAATCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGTGTGGCCCCAGGCACTGAAAGAATTAGCACAACAAAGGACATAGAAATAGGGACAAGAGAATATCCACCTGTTAAAGTTATGCAAAATGCAGTTGTTGGCACAAAAGGAGTACTCAGTTACAGATTAAACCTTGAAGACTTCCCTGCTAATGCTAGAGCTTATGCATATTTTGCTGAGATTGAAGATCTGGGTAAGAATGAGACTAGAAAATTCAAATTACAACAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACATTCTATATGAACCAAGTTATATGAATGTGACTCTAGAATTTGTTCTGTCATTCTCTTTTGTTAAGACCCCAGATTCTACTAGAGGACCTCTTCTAAATGCATTGGAAATAAGCAAATATGTAAAGATTGCTTCAAAGACAGATAAGCAAGACTTAACTGTTGTAAATGCATTAGGATTCTTGTCTGCTGATAGTTTCCAAACAAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAATGGGTGAATTGTAGTACCACACCACCACCAAGAATTACAAAAATATTTCTTTCAAGAAGGAATTTGAAGGGTGAAATACCACCTGAGCTCAACAACATGGAAGCATTAACAGAGTTGTGGTTAGATGGAAACTTGCTTACAGGACCATTACCTGACATGAGCAATCTTATAAATCTAAAGATTGTGCATCTAGAGAACAACCAGTTGACTGGTCGACTACCATCTTACCTGGGTAGTTTGCCAAGCTTACAAGCTCTGTTCATACAGAATAACTCATTTAGTGGGGAAATACCAGCCAAATTAATATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTATATAGAGGAAGCAAGAAGCATTTTAAGTTGATACTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTATTCTTAGGAAGTTTGGTGCTATTGCATAATATGAGAAGAAAGACATCTCATCAGAAACATGAGGAAAAAGGAATTTCTGGACGCACTAACAGTAAACCTTTAACTGCATACTCATCTGTTCGGGGTGGAAATATAATGGATGAAGGTACTACTTGCTATATCACACTCTCAGAGTTGAAAGAAGCTACTAACAATTTTTCAAAGCAAATTGGCAAAGGAAGCTTTGGATCTGTGTATTATGGGAAAATGGGAGATGGAAAGGAGGTGGCAGTTAAAAGTATGACTGATTCATCCAGTCATGGAAACCAACAATTTGTTAATGAGGTAGAAATCAAATTCATTCCTTTAGCATTTTCATATTCAGATTCTAATAGAAAACAGGTAGCCCTCCTATCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGCATCTTCTGGTTTATGAATATATGCACAATGGCACTTTACGGGATCACATTCATGAATGTTCCAAGAAGAAGAACTTAGATTGGATAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGTAATCCTAGTATCATTCACCGAGATGTAAAGACAAGCAATATTCTCTTAGACATCAATATGAGAGCAAAAGTTTCAGACTTTGGACTCTCTAGATTAGCTGAAGAAGATTTAACACATATATCAAGTATTGCAAGGGGAACTATAGGCTACCTAGATCCTGAGTACTATGCAAATCAGCAATTGACAGAAAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAGAAAGCCTGTGATATCAGAAGACTATGGTGCTGAAATGAACATTGTTCATTGGGCTAGATCATTAATTTGTAAAGGAGATGTGATGAGCATCATTGACCCTTCTCTAGCTGGGAATGTCAAAAGTGAATCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGCACAACATGGTGCCTCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGATCAGAAAATAAGCTAAAATCATCATCTTCAGGTAGTAGTAGTTGTTCAAAACCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTATCAAATGGTTGTCTCCCATCAGCAAGATAA 2856 0.375 MGLCSLFLVILPLWTSFAICQLEEFVSIDCGGTSNYTDRNTGLAWISDSGIMQHGTPVVVESPNGSMVQYQNRRDFSIDNKKYCYTLSTEERRRYLVRATFQYGSLENGDTYPQFQLYLDATKWTTVSIYDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGATSEDAVRYPDDPYDRIWESDLIRRQNYLVGVAPGTERISTTKDIEIGTREYPPVKVMQNAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGKNETRKFKLQQPYIPDYSNAVVNIAENANGSYILYEPSYMNVTLEFVLSFSFVKTPDSTRGPLLNALEISKYVKIASKTDKQDLTVVNALGFLSADSFQTNEGDPCVPTPWEWVNCSTTPPPRITKIFLSRRNLKGEIPPELNNMEALTELWLDGNLLTGPLPDMSNLINLKIVHLENNQLTGRLPSYLGSLPSLQALFIQNNSFSGEIPAKLISGKIIFNYDGNPGLYRGSKKHFKLILGISIGVLVILLILFLGSLVLLHNMRRKTSHQKHEEKGISGRTNSKPLTAYSSVRGGNIMDEGTTCYITLSELKEATNNFSKQIGKGSFGSVYYGKMGDGKEVAVKSMTDSSSHGNQQFVNEVEIKFIPLAFSYSDSNRKQVALLSRIHHRNLVPLIGYCEEEYQHLLVYEYMHNGTLRDHIHECSKKKNLDWIARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTIGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVISEDYGAEMNIVHWARSLICKGDVMSIIDPSLAGNVKSESIWRVVEIAMQCVAQHGASRPRMQEIILAIQDAIKIEKGSENKLKSSSSGSSSCSKPHSSRKTLLTSFLEIESPDLSNGCLPSAR. 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05842 951 Pfam Protein tyrosine and serine/threonine kinase 609 893 IPR001245 GO:0004672|GO:0006468
Seca11g05842 951 Gene3D Phosphorylase Kinase; domain 1 586 657 - -
Seca11g05842 951 SMART serkin_6 607 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05842 951 SUPERFAMILY Protein kinase-like (PK-like) 594 893 IPR011009 -
Seca11g05842 951 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Seca11g05842 951 PANTHER OS07G0107800 PROTEIN-RELATED 456 900 - -
Seca11g05842 951 Gene3D Ribonuclease Inhibitor 370 508 IPR032675 -
Seca11g05842 951 ProSiteProfiles Protein kinase domain profile. 607 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05842 951 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 702 909 - -
Seca11g05842 951 CDD STKc_IRAK 613 893 - -
Seca11g05842 951 Gene3D Transferase(Phosphotransferase) domain 1 702 919 - -
Seca11g05842 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Seca11g05842 951 SUPERFAMILY L domain-like 397 503 - -
Seca11g05842 951 Gene3D Phosphorylase Kinase; domain 1 662 701 - -
Seca11g05842 951 Pfam Malectin-like domain 28 361 IPR024788 -
Seca11g05842 951 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 410 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05842 Seca-Chr11 158626791 158632483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05842 1 951 Receptor kinase-like Gene Family AT1G67720 67.749 0.0 1284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca11g05842 Malectin_like 1e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05842 - - gmx:100790944 1571.21