Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05833 ATGAAGAAAATGATGAATGACAAAGCTCTGGTGAGGCATTTGGCAGCTTGTGAGACTATGGGATCAGCTACAACTATATGTAGTGAGATCTTGGGGACACGAACAGAGTCAGCAATATTGGAGTTTGGGTTATCACTAGGTGGGGATTTTCAAGCAGAGAGACAAGCATGCAAACTTATTAATGTTGAGCCATTCAACTCCGGGAAGAAAAGAATGGGTGTAGTTGTGGAGCTCCCTGAAAGAGGTTTACGAGCCCATTGTAAAGGTGCTTCTGAAATAATTATTGCTGGTTGTGACAAGGTGATTGAATCAAAAGGTGATGTTGTCTCTCTTGATGAAGAATCAAGTAATTATCTTAATAGAACAATCAACCAGTTTGCTAGTGACACACTTACAACTCTTTGCCTTGCCTATATGGAACTGGAAAATGGGTTCTATGCTGAAGACTCTATTCCAGCTTCTGGGTACACTTGTTTAGGAATTATCTTCTTGCTTTTTTCTCATTATTACTTGGTTAATTTCAGTTTCCTTTCTTTGTTTCAAGTTGGTATTGGTTGA 558 0.3907 MKKMMNDKALVRHLAACETMGSATTICSEILGTRTESAILEFGLSLGGDFQAERQACKLINVEPFNSGKKRMGVVVELPERGLRAHCKGASEIIIAGCDKVIESKGDVVSLDEESSNYLNRTINQFASDTLTTLCLAYMELENGFYAEDSIPASGYTCLGIIFLLFSHYYLVNFSFLSLFQVGIG. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05833 185 PANTHER CATION TRANSPORTING ATPASE 1 35 - -
Seca11g05833 185 Gene3D - 2 165 IPR023299 GO:0000166
Seca11g05833 185 Pfam Cation transport ATPase (P-type) 28 101 - -
Seca11g05833 185 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 9 162 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05833 Seca-Chr11 158518845 158519402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05833 1 35 Primary Pumps ATPases AT4G37640 88.571 1.18e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05833 K01537 - gmx:100776926 219.935