Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05832 ATGAAACTGTCGTCGGCTGGTTTTAGTCCTCCACCCCAGGAAGATCTTGGCTTTGCCAAGAATATGCTAAAATCATTTTTGTCCTTTGACGCACTTGGGGGCGGTTATGAACTTTCTGTTCCATGTTTCATGACATTGGGATGGATTTTTGTAGGAGAAAAGCGAGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTGGTCTACTTTCCACAAGGTCACAGTGAACAGGTTGCTGCATCTACCAACAGGGAAGTGGATGCCCATATCCCCAACTATCCAAGCTTGCCCCCCCAACTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACCGAGACAGATGAAGTATATGCACAGATGACCTTACAACCTCTGAATCCTGTATGA 429 0.4499 MKLSSAGFSPPPQEDLGFAKNMLKSFLSFDALGGGYELSVPCFMTLGWIFVGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPV. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05832 142 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 53 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05832 Seca-Chr11 158503919 158506369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05832 1 140 B3 DNA Binding Superfamily AT1G30330 67.143 3.00e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05832 - - lja:Lj0g3v0288979.1 195.282