Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05810 ATGCCACTATCATTTGAGATAAATGAATCGGTGTCAGATTGTGATGAAGAGTTAAAGCCTAAGATAGGGCAGATATTTGATACATTAGAAGATGGTGAAGAGTTTTACAAAAGATATACACACAATGTTGTATTTAGCGTGCGTTGCTCATCAGAAAGTAAAAACAAAGATGGAGTAAAGCGCTGGAAGTATTTTGTTTGCTCCAAAGAAGGTTATAAACCAACTAAAGCAGAAAATATGAAACAAGGGAAATCAACAGTTAAGGCTAGAAGAAGAAGTCTAACAAGAGAAGGATGTAATGCAAATGTTGCTTTCAAATTGTTAGAGGGAGGTAAGTATGAGCTTGCTCGATTTCATGAGAGCCATACACATACACTTGCCACACCTAGGAAAAGACAATTTCTTAGATCAGTAAGAAAAGTGAATCATGTTCGTAAGAGTTTGCTTTATGCTTATAATAAATCAAATGTCGGGCCTTCAAAAACATATCAGTTATTGAAAGAACAAGTTGGAGATGCATATGTATTTGTTGAAAACTTTAAGAGGAAGCAAGAAGTGAATCCATCATTTTACTATGCATATGAGGTAGATGCAGAAGATAGACTAAAATATGTGTTTTGGGCAGATGAAGCACAAAGGCATAAGGAGTTGCTTGCTGATAATGATTCACTTCATTCTCTACCAGTACTGAAGTTGGATCATGGTTTAGAGAAGCATGGAAGAGATATTTATACTCCGTGA 741 0.3549 MPLSFEINESVSDCDEELKPKIGQIFDTLEDGEEFYKRYTHNVVFSVRCSSESKNKDGVKRWKYFVCSKEGYKPTKAENMKQGKSTVKARRRSLTREGCNANVAFKLLEGGKYELARFHESHTHTLATPRKRQFLRSVRKVNHVRKSLLYAYNKSNVGPSKTYQLLKEQVGDAYVFVENFKRKQEVNPSFYYAYEVDAEDRLKYVFWADEAQRHKELLADNDSLHSLPVLKLDHGLEKHGRDIYTP. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05810 246 Pfam FAR1 DNA-binding domain 34 127 IPR004330 -
Seca11g05810 246 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05810 Seca-Chr11 158222224 158223820 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g05810 FAR1 3.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05810 - - mtr:112422154 267.7