Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05784 ATGGATGAGCTTTTAGCGGTGGTTGGTTACAAGGTTAGGTCATCGGACATGGCTGAAGTTGCTCAGAAGCTTGAACAGTTAGAAGAAGCCATGGGAAATTTCCAAGACGAAGACATCATCGCTCAACAACTCTCATCAGATACCGTCCATTACAACCCTTCTGATATCTCCAACTGGCTTCAAACCATGCTTTCTAATTTCGATCCTCCACCTCCTTCTTCTCTCTCATCTTCTTCCGATTACGATCTCAAAGCCATTCCAGGGAAAGCAATCTACGCCTCCGGAGCAGAATCCGAATCTCCATCCAACAAACGAACCAAAACCACAACCACAACCGCCGAGTCAACTCGTTCGGTTGTCGTTGTCGACTCGCAGGAAAACGGGATCCGACTCGTTCACAGCCTCATGGCTTGCGCTGAAGCGGTGGAACAGAACAAGCTAGGAGTAGCAGAAGCTCTGGTGAAGCAGATCGGCTACCTCGCCGTTTCACAAGAAGGTGCTATGAGGAAAGTCGCTACCTACTTCGCTGAAGGTCTTGCCAGAAGAATCTACAGAGTCTATCCTCCACAACCGCAACAGCATTTTCTCTCTGATACTCTTCAGATCCATTTCTATGAAACCTGTCCTTACCTCAAGTTCGCTCACTTCACTGCGAATCAAGCCATTCTCGAAGCGTTTCAAGGTAAAGATCGTGTTCATGTCATCGATTTCGCAATCAACCAAGGCATGCAGTGGCCGGCGTTGATGCAGGCTCTGGCTCTTCGACCTGGTGGTCCACCGGCTTTTCGTCTCACCGGAATCGGACCTCCGGCGCCGGATAACTCCGATCACCTACAACAGGTTGGTTGGAAACTGGCTCAGTTAGCGGAAACGATTCATGTTCAGTTTGAATACAGAGGATTCGTGGCTAACAGTCTCGCGGATCTAGATGCTTCCATGCTTGAACTCCGTTCACCGGAAACTGAAGCTGTCGCTGTTAACTCTGTTTTCGAGCTTCACAAGCTTCTTGCTCGTCCCGGCGCGTTGGAGAAGGTTTTCTCTGTTATTCGTCAGATTCAGCCGGAGATTCTCACCGTCGTGGAGCAGGAAGCGAACCACAATGGACCGGGTTTTCTCGACCGGTTCACTGAGTCGCTGCACTATTACTCCACCTTGTTTGACTCGCTGGAGGGGTCTTCGGTTGACCCGCAGGACAAGGCCATGTCAGAGATTTACCTTGGGAAGCAAATCTGCAACGTGGTGGCGTGTGAAGGAGTGGACCGGATCGAGCGGCACGAGACGCTGAACCAGTGGCGGAACCGGTTCGGGTCGGCTGGGTTTTCTCCGGTTCATTTGGGATCCAACGCGTTCAAGCAAGCTAGCATGTTGCTGGCACTTTTCGCCGGTGGGGATGGGTATAGGGTTGAGGAGAACGATGGGTGTCTCATGTTGGGTTGGCACACTAGGCCAATGATTGCCACCTCTGCGTGGCAACTCGCTAACAAATCGGTTGCTGCTCACTGA 1503 0.5136 MDELLAVVGYKVRSSDMAEVAQKLEQLEEAMGNFQDEDIIAQQLSSDTVHYNPSDISNWLQTMLSNFDPPPPSSLSSSSDYDLKAIPGKAIYASGAESESPSNKRTKTTTTTAESTRSVVVVDSQENGIRLVHSLMACAEAVEQNKLGVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYRVYPPQPQQHFLSDTLQIHFYETCPYLKFAHFTANQAILEAFQGKDRVHVIDFAINQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQQVGWKLAQLAETIHVQFEYRGFVANSLADLDASMLELRSPETEAVAVNSVFELHKLLARPGALEKVFSVIRQIQPEILTVVEQEANHNGPGFLDRFTESLHYYSTLFDSLEGSSVDPQDKAMSEIYLGKQICNVVACEGVDRIERHETLNQWRNRFGSAGFSPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPMIATSAWQLANKSVAAH. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05784 500 ProSiteProfiles GRAS family profile. 122 491 IPR005202 -
Seca11g05784 500 SMART DELLA_2 2 77 - -
Seca11g05784 500 Coils Coil 17 37 - -
Seca11g05784 500 Pfam GRAS domain family 131 491 IPR005202 -
Seca11g05784 500 MobiDBLite consensus disorder prediction 94 115 - -
Seca11g05784 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 486 IPR005202 -
Seca11g05784 500 Pfam Transcriptional regulator DELLA protein N terminal 2 71 IPR021914 -
Seca11g05784 500 Gene3D - 1 67 IPR038088 -
Seca11g05784 500 MobiDBLite consensus disorder prediction 96 115 - -
Seca11g05784 500 FunFam DELLA protein GAI 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05784 Seca-Chr11 157776347 157777849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05784 1 493 GRAS Transcription Factor Family AT1G14920 71.930 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca11g05784 GRAS 3.2e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05784 K14494 - gmx:547718 800.431