Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05780 ATGTCAGAGCTTTGGCTTAAACTAAAGAAATCACTTCCTTGCAAAACTCACTCTTCAGAAGTTCATGATCCAAAGGCAAGTAGGCACCAAAGAAAAAGGCAAGAAGATCATGTTCACTGTTCAAATATCAAAGAATTGATACATGATAGCATGAGGCGCTCAGAGAAACAACCAAGTACTCCAAAATCTCAAGCAAGCACTGCTATGCTTCTTAACCCTGTTACTCATGAAATTGTCCTTGATAGCACAAGTGGTGAGGTTAAAATGTGTCCATGCTTTCCTTATCCTCAAAATTATAGTGAAGATGGCAAAGGTGTGGAAGGTTTTAATCATGGATCAATGAAGCGAACTATACCTTCAATGGAAACACATTGTGTTGATTGTGATGAATGTAATGTTTTCTCAAAACCAAAGGTGTTAGCGCAGAAAGATTCTAATGATCCTCCAACACTTGTTCGTCATCATCAATGTGGTCAGAAACAAAAAACTCTTGACACTATTGAAGAACTTGATATCTCTGAGCATTCAGTCATCCAGCTTCAAAAAGAAGATTCATCTTGGCAAATTATTGAAAAAATATGTGAAGCTAACCATATCCATTCTGAAAGCAAGGCAACAAAGATTGAATGTGTCTTAAAAGTCCAGAACACACAAAAGACATTTGCTTGCTTTGAGGAATGTAGAGAAATGGTAAAGACTAATGCTGAAAGGTTAAAACATAAGCACCCGCGATGCTTGGTTGATGGAAATGAGCTATTGAGGTTTCATGGTGCATCTATTGAATGCTCCCTTGGTATACATGGCTCTTCTAGCCTGTGCACTTTCGACCAATGTGGTGTATGTCAAATTTTGAGGCATGGTTTCTCAGCCAACCAAGAATTCCATGGTGCTTTTGGAATTAACACCAATTCTACTTGTGAAAAAGCCATTGATTCCATCGGTTCATCTAATAAACCAATCTTGAGAAAGTCTGTTATAGTGTGCAGAGTAATAGCTGGGAGAATCAATTATCCTCTACAAGAGATTCAAGGAATGACTATTTCAGAGCATGATTCTTTGGTGAAAAAAATAAGTGGCCAATCAAATATTGAAGAACTCCATGTTTTAAATCCTAGAGCTGTCCTTCCTTGCTTTGTGGTAATCTATAGACTCTGA 1155 0.3766 MSELWLKLKKSLPCKTHSSEVHDPKASRHQRKRQEDHVHCSNIKELIHDSMRRSEKQPSTPKSQASTAMLLNPVTHEIVLDSTSGEVKMCPCFPYPQNYSEDGKGVEGFNHGSMKRTIPSMETHCVDCDECNVFSKPKVLAQKDSNDPPTLVRHHQCGQKQKTLDTIEELDISEHSVIQLQKEDSSWQIIEKICEANHIHSESKATKIECVLKVQNTQKTFACFEECREMVKTNAERLKHKHPRCLVDGNELLRFHGASIECSLGIHGSSSLCTFDQCGVCQILRHGFSANQEFHGAFGINTNSTCEKAIDSIGSSNKPILRKSVIVCRVIAGRINYPLQEIQGMTISEHDSLVKKISGQSNIEELHVLNPRAVLPCFVVIYRL. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05780 384 SUPERFAMILY ADP-ribosylation 177 383 - -
Seca11g05780 384 Gene3D - 168 383 - -
Seca11g05780 384 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 382 - -
Seca11g05780 384 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05780 Seca-Chr11 157718705 157721486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05780 1 354 C2H2 Transcription Factor Family AT4G27240 35.751 2.03e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05780 - - cam:105851073 457.603