Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05759 ATGGCTTTGCTCAACATTCACATATTGCTTACCCCAATATTCACCTTCACCTTCTTTTTGACCACTTTTCCAACAACATCCATTGGCCAAGAACATAACAAATACACAGAGTGTAGCCAGCCATACACCTGTGGAGAAATCTCTGGCATCTACTACCCTTTTTGGGGAGAGAACAGACCTAGTTATTGTGGCAGCAATAATCAATTTGAGCTCAAATGTGAGGCTAATCAAAACACATCCATTCAAGTTGGTTCACAAAGTTTCCATGTGTTGCGCATTGATCAATTGAGTTACACCATGAAAATGGTTAGAAAAGGCCTTGTTTATGATCATTGTTCTTCTGGTTTGACCAACACTTCTTTGAGCTCAAATGGTCTTATTCATTTTATGCCTAATGTGAGGAACATCACCATCTTCTATGATTGTCCTGAAAATGGCACAAACTCTTTTCCCTGCTATGAAGATAGGAACAAGCATGCTTTGTATGTGAATTCCACTAGTGCAGAAGTGCAAAATTGCAAAGGAGTTAGTATTGAAGTTCATGTGACACAGGGAGTTGAGCTTGATGGTGGTGGAATTGAAGGGCTGAACAAAGGCTTGAATGCTGGGTTTGATGTGAGCTATGATTATGATATTCAAGCTTGCTTAAAATGCTTTTTAAGTAATGGTTCCTGCGGAACCAATGATGAGTCTCAGTTTTCCTGTTATTGCCCTGATGGAACTGTTTCTTTGGATTGTTCTCATCATCACAGTAATAAATGGAATTGGAAAAGGAAGCTTGGTGTAGGAGTTGCTGCTGCTGTGGCCACTGCAGTTACAATAGGCATTGCCTTTTATATCTATTATTGGCAAAAGAAGAAGAAGAACCTTCATGCAGTATCATCTTTACAATCTCAGAGCTTCTCTTCTTGTTCTTCTTTAGGAAACACTGAGAGGGGACATAAATACCGTGGACTTCACTTCTTCACCTATAGTGAACTTGAAGAGGCCACAAACTACTTTGATCCAACCAGAGAATTAGGAGATGGAGGCTTTGGAACAGTTTATTTTGGCACACTTAAGGATGGGCGTTTTGTTGCAGTGAAAAGGATCCGTGAACTTCTTCTTGTATATGAGTATGTTCCTAATGGAACTGTTGCTGATCACCTTCATGGTCCAAGAGCAAAACCTGGCACACTCACTTGGCATATCAGAATCAACATTGCCATAGAGACTGCTAGTGCATTGGTATATCTCCATGCTTCTGACATCATCCATAGAGATGTGAAAACCAAAAACATTCTCCTTGACAATCACTTTAGTGTCAAAGTAGCAGATTTTGGACTCTCACGCCTTTTCCCTAACCATGTCACTCACATTTCAACTGCTCCACAAGGGACTCCTGGTTATGTAGATCCAGAATATCATGAGTACTACCAGCTTACTGACAAAAGTGATGTTTTTAGCTTTGGGGTTGTGTTGATGGAGCTAATATCATCCATGCCTGCTGTTGATATCTCAAGGCATAGGAAAGAAATCAATTTGTCTAACATGGCCATTAAAAGGATTCAAAATGGGACATTACATGAGCTAGTGGACCCTACACTTGGGTTTGAATCAGATTTCAAGGTAAGGAAAATGATCAATGCTGTGGCAGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGATGTGAGACCTTCTATGGTAGAAGTGTTGGAGAGGCTGAAGGATATAGAGAGTGATGGGAAACATAATAGCAAACATGAGGTGATGGATATATTAGAAGATGATGATGCTTTGCTGAAGAATGAGCCACCACCTTCACCAGATTCAAATTTGAGAGGCATATCTACTACCCCAAATGGAAGCTAA 1854 0.4024 MALLNIHILLTPIFTFTFFLTTFPTTSIGQEHNKYTECSQPYTCGEISGIYYPFWGENRPSYCGSNNQFELKCEANQNTSIQVGSQSFHVLRIDQLSYTMKMVRKGLVYDHCSSGLTNTSLSSNGLIHFMPNVRNITIFYDCPENGTNSFPCYEDRNKHALYVNSTSAEVQNCKGVSIEVHVTQGVELDGGGIEGLNKGLNAGFDVSYDYDIQACLKCFLSNGSCGTNDESQFSCYCPDGTVSLDCSHHHSNKWNWKRKLGVGVAAAVATAVTIGIAFYIYYWQKKKKNLHAVSSLQSQSFSSCSSLGNTERGHKYRGLHFFTYSELEEATNYFDPTRELGDGGFGTVYFGTLKDGRFVAVKRIRELLLVYEYVPNGTVADHLHGPRAKPGTLTWHIRINIAIETASALVYLHASDIIHRDVKTKNILLDNHFSVKVADFGLSRLFPNHVTHISTAPQGTPGYVDPEYHEYYQLTDKSDVFSFGVVLMELISSMPAVDISRHRKEINLSNMAIKRIQNGTLHELVDPTLGFESDFKVRKMINAVAELAFQCLQSSKDVRPSMVEVLERLKDIESDGKHNSKHEVMDILEDDDALLKNEPPPSPDSNLRGISTTPNGS. 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05759 617 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 365 613 IPR044652 GO:0004672
Seca11g05759 617 SUPERFAMILY Protein kinase-like (PK-like) 317 573 IPR011009 -
Seca11g05759 617 Pfam Protein kinase domain 366 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05759 617 MobiDBLite consensus disorder prediction 576 597 - -
Seca11g05759 617 MobiDBLite consensus disorder prediction 576 617 - -
Seca11g05759 617 FunFam Wall-associated receptor kinase-like 20 374 582 - -
Seca11g05759 617 ProSiteProfiles Protein kinase domain profile. 254 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05759 617 SMART serkin_6 334 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05759 617 Pfam Wall-associated receptor kinase C-terminal 164 240 IPR032872 -
Seca11g05759 617 Gene3D Phosphorylase Kinase; domain 1 304 372 - -
Seca11g05759 617 Pfam Wall-associated receptor kinase galacturonan-binding 38 103 IPR025287 GO:0030247
Seca11g05759 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Seca11g05759 617 Gene3D Transferase(Phosphotransferase) domain 1 374 587 - -
Seca11g05759 617 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05759 Seca-Chr11 157492760 157496584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05759 34 617 Receptor kinase-like Gene Family AT1G25390 38.415 4.55e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca11g05759 Pkinase 1.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05759 - - gmx:100794703 797.734