LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g05754	ATGTTCTTTGGTTTCATTTTCCTTGTTGGTCAAGCAATACTGGCATACCACACTGTACCAGCCCCACATGAAACACAGAAGATGGTTCACATGACACTTCATTTCATTGCTATAATTCTTGGGATTGTTGGTATATGTGCTGTTTTCAAGTTCCATGATATGATTAACTTGGAGGATGTTTACAGTCTCCATTCATGGATTGGTCTTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTTGGACTTACTTTCATGCTTGGATCTCCTCAATCAAGGGCTGCAGTGGCTCCATGGCACATAGCTGGTGGCAGAGCACTATTTTACATGGCAATTTGTGCTGCACTAACAGGGTTGATGGAAAAGTATACTATGTTAAGACTGCTGCCACACCAGAGAGAATCTCATTTGATTAACTTCACGGGTCTAGCAATTCTCTTGTTTGGAGTATTTGTTGATATAACAGTTGGTTTGGCCCATTTTGAGTAA	489	0.4131	MFFGFIFLVGQAILAYHTVPAPHETQKMVHMTLHFIAIILGIVGICAVFKFHDMINLEDVYSLHSWIGLGTFCLFGLQWLFGLTFMLGSPQSRAAVAPWHIAGGRALFYMAICAALTGLMEKYTMLRLLPHQRESHLINFTGLAILLFGVFVDITVGLAHFE.	163

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g05754	162	Pfam	Eukaryotic cytochrome b561	1	124	IPR006593	-
	Seca11g05754	162	CDD	Cyt_b561_ACYB-1_like	1	126	-	-
	Seca11g05754	162	SMART	561_7	1	119	IPR006593	-
	Seca11g05754	162	ProSiteProfiles	Cytochrome b561 domain profile.	1	157	IPR006593	-
	Seca11g05754	162	Gene3D	-	1	159	-	-
	Seca11g05754	162	PANTHER	CYTOCHROME B561-RELATED	1	156	IPR043205	GO:0016491

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g05754	Seca-Chr11	157431374	157433223	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g05754	1	162	Chloroplast and Mitochondria Gene Families	AT1G14730	59.036	1.21e-61	188

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g05754	K08360		-	gmx:100305990	274.633

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