Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05742 ATGGCAAACCTCAAAGCCAGCAACTTTGTCTCTTTCCTGATTATGCTATCACTCCAACACTTGTTCCTTCTCTACGCTACCTCTATAAATGATCTTCATCACACAAAACCGCATGGAAATCGCTTCATGCTACTTGATAAAAACAGTTCTTCGGAGACAACACCTCCCACATCGACCAAAGTACCAATATCCAAAAAGAAAAGCGTATCCATTCCCGTTGTAGCTTCCATTGCAGCTGCGTCCTTTTTTGTGTTACTCATCATAGGATTCTTAATCTTCCGGTGTGTAAGAAGAGCTACAGCAAGAGACACAAACACGGAACACTCCAACACGTGTCGTCAGTTCACCATCGCTGAGATAAGAGCTGCCACCAACAACTTCGAAGACGGTTTAATCGTTGGGAAGGGAGGGTTTGGGAACGTGTACAAAGGCCAAATTGACAAGTGTCACACACCAGCTGCAGTTAAGAGACTCAAACCGGGTTCAGATCAAGGTGCACACGAGTTCCGAACCGAAATCAAGATGCTCTCGCAATTTCGCCACCCTCACCTAGTCTCTCTCATCGGTTACTGCAACGACGACGGAGAAATGATCCTCGTCTACGATTTCATGGCGCGTGGAACTCTACGCGATCACCTCTACGGTCCACACCACCACCATCCACTCTCCTGGAACCAACGACTCGAAATCTGCCTCGCCGCAGCGCGTGGACTTCACTTCCTCCATGCCGGCATCAACAAGCAGAGCGTGATCCACCGTGACGTGAAGAGCACCAACATCTTGCTGGACGAGAATTGGGTCGCTAAGGTTTCGGATTTCGGGTTGTCTAAGGTTGGGCCCAATGCGTCGCACGTGACCACTGATGTGAAGGGTAGTTTGGGGTATTTAGATCCTGAGTACTACATGAGTCTTTGGTTGACTCACAAATCTGACGTGTACTCTTTTGGTGTGGTTCTATTGGAGGTATTGTGTGGGAGGGCACCTATCAAGAGTAGGGTGGACAAGCACCAGGATTGCTTGGTGGCATGGGTGAAGATGTGTTGTCATGAGGGGAACATTGATCAGACGGTGGATCCTGTTCTGAGGGGAACCATCAGGCCCAAGTGTTTGAAGAAATTTGTGGAGGTTGCATTGAGTTGTTTGCATGATCATGGGAAGCAACGGCCTTTGATGAGAGATGTGGTAAACGGGTTAGAGTGTGCATTGAATATGCAAAAAGGTGGGGCCCATGTTCGGGAAAAGAAAAAGAGTAGTGAGGAGATAGCAATGAGCTTGACGAAAGTTGAGGGTCATGAAGAATTTGATGAGAAATTTGGGAGAGTGGAGGAGTCTAGTAGTAGCAAGGCTACGACAACATGTAGTGAGGAGGAACAAGCTTTGGTGTATAATGGTTCAATAATGATTTGA 1407 0.4748 MANLKASNFVSFLIMLSLQHLFLLYATSINDLHHTKPHGNRFMLLDKNSSSETTPPTSTKVPISKKKSVSIPVVASIAAASFFVLLIIGFLIFRCVRRATARDTNTEHSNTCRQFTIAEIRAATNNFEDGLIVGKGGFGNVYKGQIDKCHTPAAVKRLKPGSDQGAHEFRTEIKMLSQFRHPHLVSLIGYCNDDGEMILVYDFMARGTLRDHLYGPHHHHPLSWNQRLEICLAAARGLHFLHAGINKQSVIHRDVKSTNILLDENWVAKVSDFGLSKVGPNASHVTTDVKGSLGYLDPEYYMSLWLTHKSDVYSFGVVLLEVLCGRAPIKSRVDKHQDCLVAWVKMCCHEGNIDQTVDPVLRGTIRPKCLKKFVEVALSCLHDHGKQRPLMRDVVNGLECALNMQKGGAHVREKKKSSEEIAMSLTKVEGHEEFDEKFGRVEESSSSKATTTCSEEEQALVYNGSIMI. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05742 468 MobiDBLite consensus disorder prediction 44 62 - -
Seca11g05742 468 CDD STKc_IRAK 133 399 - -
Seca11g05742 468 FunFam Receptor-like protein kinase FERONIA 204 421 - -
Seca11g05742 468 ProSiteProfiles Protein kinase domain profile. 127 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05742 468 MobiDBLite consensus disorder prediction 43 62 - -
Seca11g05742 468 PANTHER OS07G0166700 PROTEIN 111 405 IPR045272 GO:0004714|GO:0006468
Seca11g05742 468 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Seca11g05742 468 Gene3D Transferase(Phosphotransferase) domain 1 204 426 - -
Seca11g05742 468 Gene3D Phosphorylase Kinase; domain 1 92 203 - -
Seca11g05742 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Seca11g05742 468 SUPERFAMILY Protein kinase-like (PK-like) 110 396 IPR011009 -
Seca11g05742 468 FunFam Receptor-like protein kinase FERONIA 99 203 - -
Seca11g05742 468 SMART serkin_6 127 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g05742 468 Pfam Protein tyrosine and serine/threonine kinase 133 397 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05742 Seca-Chr11 157238821 157240614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05742 53 406 Receptor kinase-like Gene Family AT3G51550 49.744 1.64e-120 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca11g05742 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05742 - - cam:101489535 561.992