Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05676 ATGACAAGAATAGAGCACCAAATCAGAATATGGTTAGGCTCTTATTCAACCCCAGAAGCAGCAGCCAGAGCCTATGATGCTGCACTTCTAGGCCTTAAAGGCTCCTCAGCAAATCTCAATTTCCCTTTAAATTCTAATTCTCAATACATTCCTCAAGATACTGTCATGTCCCCAAAATCAATCCAAAGAGTTGCTGCAGCTGCTGCTAATAGTTTCATTCAAAATGCCAGCACTAGCACTAGCACTAGCACTCCCTCTTCCTCACCTCCTCCCTCAACCTCATCATCATCAATAGCCTCCTCCCCATCAATGGTCTCTTCTCCCTCTGGTCAAATGGATGATGATGTCTCACTCATGTCATCTTTTGAGGCCTATGATCAAGCTAATGAATCAATGGCTGTGATGGAACCTTGGTACAACAGCTTAGATGGTTTACAATCCCCTAAATCTGTATGA 456 0.4342 MTRIEHQIRIWLGSYSTPEAAARAYDAALLGLKGSSANLNFPLNSNSQYIPQDTVMSPKSIQRVAAAAANSFIQNASTSTSTSTPSSSPPPSTSSSSIASSPSMVSSPSGQMDDDVSLMSSFEAYDQANESMAVMEPWYNSLDGLQSPKSV. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05676 151 SMART rav1_2 3 48 IPR001471 GO:0003700|GO:0006355
Seca11g05676 151 MobiDBLite consensus disorder prediction 75 122 - -
Seca11g05676 151 ProSiteProfiles AP2/ERF domain profile. 1 42 IPR001471 GO:0003700|GO:0006355
Seca11g05676 151 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 110 - -
Seca11g05676 151 Gene3D AP2/ERF domain 2 44 IPR036955 GO:0003700|GO:0006355
Seca11g05676 151 SUPERFAMILY DNA-binding domain 6 43 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05676 Seca-Chr11 156301849 156302304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05676 7 136 AP2-EREBP Transcription Factor Family AT1G21910 45.926 2.53e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05676 - - gmx:100819512 167.162