Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05658 ATGGAATTGCAAAACCGCTTTTATCACATTAATATTAATGCTTGGTTGATGGTGGCAGATATAGAGATGGTGAAAGAAATCATCTTGAACAACTCTTTGGTTCTAGGGAAGCCTTCTTATCTTTCCAAAGATATGGGGCCACTCTTAGGCCGTGGTATATTGTCATCAAGTGGGTTGATTTGGGCTCATCAGAGGAATATAATTGCCCCTGAACTATACCTAGATAAGGTGAAGGCAATGGTTAATCTAATAGTTAACTCCACAAATATAACACTAAAATCTTGGGAGACTAAACTAGAAAGTGAGGGAGTAGTTTCAGAGATTAAAGTTGATGATGATCTAAGAGGCTTGTCAGCTGACATAATTTCCAGAGCTTGTTTTGGGAGCAATTATATTGAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAACTCCTTTCTAAGATATATGCTGGAATTCCAGGCTTTAGGGTAGAGCATAGAAAGTTTTTATTTCAGCCCAGTAAATATCCCCCCATATTTGTGGTTAGTGTTAACGAAAAGGAAAGAGCGTGCCCTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCAAAGGGCATGCCCTCTATCATGACCTTAATACATTGGGGCATTTGGCTCTGGCAAAAGCAAATCAGAGCTTGCTAGACTATCTTTGTTCAACCTCTCTTTGTCTCAAGTTCAAAATTTTCTTCAGCAAAAGCCCCAAGGTTGAGAAGATTTTTGGCCCAGGAAACCAATATGTCACAGCTGCAAAAATGATTCTGCAAAATAGTGAAGCTATGGATGCAATTGACATGCCAGCTGGTCCATCTGAAGTTTTGGTCATTGCAGATAAGCATGCAATTCCTCGTCATGTAGCTGCCGATTTGCTTTCCCAGGTTTACTGA 918 0.3954 MELQNRFYHININAWLMVADIEMVKEIILNNSLVLGKPSYLSKDMGPLLGRGILSSSGLIWAHQRNIIAPELYLDKVKAMVNLIVNSTNITLKSWETKLESEGVVSEIKVDDDLRGLSADIISRACFGSNYIEGKEIFTKLRDLQKLLSKIYAGIPGFRVEHRKFLFQPSKYPPIFVVSVNEKERACPLHLAEALEYCTSKGHALYHDLNTLGHLALAKANQSLLDYLCSTSLCLKFKIFFSKSPKVEKIFGPGNQYVTAAKMILQNSEAMDAIDMPAGPSEVLVIADKHAIPRHVAADLLSQVY. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05658 305 Gene3D Cytochrome P450 4 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05658 305 Gene3D Nitrogenase molybdenum iron protein domain 245 279 - -
Seca11g05658 305 Gene3D Nitrogenase molybdenum iron protein domain 280 303 - -
Seca11g05658 305 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 159 - -
Seca11g05658 305 SUPERFAMILY Cytochrome P450 15 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05658 305 Pfam Histidinol dehydrogenase 244 303 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca11g05658 305 Pfam Cytochrome P450 17 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g05658 305 PRINTS Histidinol dehydrogenase signature 242 267 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca11g05658 305 PRINTS Histidinol dehydrogenase signature 274 295 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca11g05658 305 PRINTS Histidinol dehydrogenase signature 296 305 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca11g05658 305 SUPERFAMILY ALDH-like 243 303 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05658 Seca-Chr11 156026716 156031528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05658 8 149 Cytochrome P450 AT5G24910 51.748 3.75e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05658 K24544 - gmx:100780335 236.498