Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05652 ATGGACTTTAATGGTGATGATTCAGCTGTTAATCTGGATAATGATAGGGACGTAAGTTATAGTGACTCTTCTAGCAGTCATGAAATGACTAGTGGAAATGATATACATAGTGATGAGGGAAATGAGTCTATTCATCCAGAGGCTGATATGGATGAGGAGAATTATGTTATGGATACTGATCTTAGAGACGGTGTGTCAAGGAGGATAATTGACTTGACAAATGATGATATAAGGGCTTTGGAGTTCTCTAGTGAAGAGCATGCGTACAATTTTTACTTTTCTTATGCAAAATGTAAAGGATTTGCTATGAGGAAGGATGATGTTATTCGTGACAAAAAAGGGATGGTCATAATGCGGCAGTATTTATGTAGTAGGGCTGGTCTGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAAACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGATTTAACCCCTGCAAAGTTTGTACTTCTAATTCCTAATTATAGGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGCTGTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGTAAACTTACTCATCTATTCTGGTGTGATGCAAATAGTCGTGCGGATTTTCAATTTTTTGGGGATGTGCTCGCATTTGATGCAACATACAAGAAGAACAGATATAAGTATCCATTGGTGATATTTTCTGGGAAAAATCATCACTCTCAAACAGTAATATTTGGGTGTGCACTCATTGCTGATGAAACAATTGATACTTATAAGTGGGTGCTAAGGATGTTTTTGGAAGCAATGTTCAACAAGCATCCAGCAGCAGTGGTGACTGATGGAGATGGTTCTATGAGGGAAGCTATTAAGGTAGTATTTCCAAATGCCTCTCATAGGTTATGTGGGTGGCATTTGAATAAGAATGCATGTGAAAATGTTAAGAATCCAAAATTTTTGGATGATTTCAAGAAAGCAATGTATAGTAATTTCACTCCAAATCAATTTGAAGAGTTTTAG 1281 0.3708 MDFNGDDSAVNLDNDRDVSYSDSSSSHEMTSGNDIHSDEGNESIHPEADMDEENYVMDTDLRDGVSRRIIDLTNDDIRALEFSSEEHAYNFYFSYAKCKGFAMRKDDVIRDKKGMVIMRQYLCSRAGLRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHDLTPAKFVLLIPNYRGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDAVAGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDANSRADFQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFLEAMFNKHPAAVVTDGDGSMREAIKVVFPNASHRLCGWHLNKNACENVKNPKFLDDFKKAMYSNFTPNQFEEF. 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05652 426 PANTHER OS01G0519700 PROTEIN 79 424 - -
Seca11g05652 426 MobiDBLite consensus disorder prediction 1 53 - -
Seca11g05652 426 MobiDBLite consensus disorder prediction 14 31 - -
Seca11g05652 426 MobiDBLite consensus disorder prediction 32 53 - -
Seca11g05652 426 Pfam MULE transposase domain 302 396 IPR018289 -
Seca11g05652 426 Pfam FAR1 DNA-binding domain 90 180 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05652 Seca-Chr11 155932281 155933561 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g05652 MULE 8.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05652 - - ccaj:109792835 524.242