LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g05622	ATGGCGCCGAGCATCCAACTAACTCCCGCCGGCGCCGGCGCCGGCGAAGATTCCGGCGACCTCGAGGACGTGAGACTCCTGGATTCCTACGAGAAATACGACCACGACGACAACACGAGGCGGATTCAGGTCAGAATCTCCGGCATGACATGCGCCGCTTGCTCCAACTCCGTTGAGGCGGCTCTTAAGTCCGTTGACGGCGTCATCGAAGCATCTGTTGCCCTGCTTCAGAACAAAGCCGACGTCGTTTTCAACCGAAGCCTTGTCAAGGATGAAGACATTAAGAATGCGATTGAAGATGCAGGGTTTGAAGCGGAGATTTTACCCGAGCCCGGTTCACTTGGACCGGACCGGCGTGGTGACGGCGCAGTCTTGGTGGGGCAGTTCACGATTGGGGGAATGACGTGTGCGGCGTGTGTGAATTCCGTGGAGAGCATTCTGAGGAACCTCTCGGGAGTGAAAAAAGCAGTGGTGGCTTTGGCTACTTCGTTGGGTGAAGTTGAGTATGATCCCAATGTGATTAGCAAGGATGATATTGTTACTGCAATTGAAGATGCAGGTTTCGAGGCTTCGTTTGTGCAGAGTAGTGGGCAGGACGAGGTGGTTTTGGGGGTTGTTGGTGTGTATTCTTTGGTTGATGCTCAAGTTTTGGAAGGCATGCTCAGTGGGATGAAAGGGGTGAGGCAGTTCCGGTTTGATCCTGTGTTGAATGAACTGGATGTTGTGTTTGACCCTGAAGTTATTAATTCTAGATCGTTGGTTGATGGGATCCATGTGGGAAGCAATGGCAAGTTTAAGTTACATGTTAGAAACCCTTATGCCAGAATGGCTTCTAAAGATGTTTCAGAGACCTCAGCTATGTTTCGACTTTTTATTTCCAGCTTGCTTCTTAGTATTCCTCTCTTCTTCATGGGGGTAGTTTGTCCTCATATACCATTGGTATACTCCTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGGTGATTGGCTGAAGTGGGCATTGGTGAGTCTTATCCAATTTGTGGTTGGGAAGCGCTTCTACATAGCAGCTATTAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACAACAGCTTCTTATGTTTATTCTGTTTGTGCTCTTCTGTATGGTGCTCTCACTGGATTTTGGTCTACAACATACTTTGAAACCAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCCATTAAGAAGTTAGTGGAACTTGCTCCTGCAACAGCTTTATTGGTTGTCAAAGATAAAGGTGGTAAATCTATTGAGGAAAGGGAAATAGATTCCTTGCTCATTCAACCTGGTGACACATTGAAAGTTCTTCCTGGCACAAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACCGGTGAATCTATACCTGTTTCGAAGGAGGTCAATGCATCTGTTATTGGAGGTACGATCAATTTGCATGGTGTCCTTCACATTCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGCTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATACAAAAGTTTGCTGATTATGTAAGTATTGTGGTCATACTCTTTGGTTTGCAGGTAGCAAGCATATTTGTTCCTACAATTGTGGCTTTGTCATTATTGACACTATTGTGTTGGTATATTGCTGGGGCTCTTGGAGCTTATCCTGAAGAATGGCTGCCTGAAAATGGAAATCACTTTGTGTTTGCCCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCCTGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGAGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGATTCCTTGGAAAGGGCTCAGATGGTGAAGTATGTTGTATTTGATAAAACAGGCACTTTAACTCAGGGGAAAGCCACTGTAACTGTTGCCAAGGTGTTCACAGGAATTGACCGTGGAGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACATCCACTGGGAAAAGCGATATTACAATATGCCCGCCATTTTCATTTCTTTGATCCAACCAATGGTACCCAGAATAATGCCAAGGAGTCAGGGTGGCTTTATGATGTCTCTGACTTCTCTGCTATTCCGGGAAAGGGTGTGCAGTGCTTTATAAATGGAAAGCGGATTTTGAGTTGCTTACTTGAGGCAGTATGTCCTGAACAGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATTGATATTTCTACCGAAGTGGAAAATTTTGTTATAGAGCTTGAAGAAAGTGCAAAGACAGGGATACTAGTAGCATTTGATGATGTATTAACTGGAGTCTTAGGGGTCGCAGACCCACTAAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCAAGAAAATGGGAATCATACCTGTTATGGTCACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTGGCATTGAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCAGATGTTGTTCGTTCATTCCAGAAAGATGGAAGTATAGTTGCAATGGTGGGTGATGGTATCAATGACTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGGGCTGGTACAGATATAGCAATTGAAGCTGCTAACTATGTGTTGATGAGAGATAATTTGGAAGATGTGATCACAGCCATTGATCTTTCTAGAAAAACATTTTCTCGCATTCGATTGAATTATGTCTTCGCAATGGCCTACAATGTTGTTGCTGTACCAGTTGCTGCTGGGGTTTTATTTCCTTCACTGGGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCGTCCGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCCAGACTTACTACAATACTTGAAATAGTTGTAAATTAA	3036	0.4489	MAPSIQLTPAGAGAGEDSGDLEDVRLLDSYEKYDHDDNTRRIQVRISGMTCAACSNSVEAALKSVDGVIEASVALLQNKADVVFNRSLVKDEDIKNAIEDAGFEAEILPEPGSLGPDRRGDGAVLVGQFTIGGMTCAACVNSVESILRNLSGVKKAVVALATSLGEVEYDPNVISKDDIVTAIEDAGFEASFVQSSGQDEVVLGVVGVYSLVDAQVLEGMLSGMKGVRQFRFDPVLNELDVVFDPEVINSRSLVDGIHVGSNGKFKLHVRNPYARMASKDVSETSAMFRLFISSLLLSIPLFFMGVVCPHIPLVYSLLLWRCGPFLMGDWLKWALVSLIQFVVGKRFYIAAIRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKSIEEREIDSLLIQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVSIVVILFGLQVASIFVPTIVALSLLTLLCWYIAGALGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVVFDKTGTLTQGKATVTVAKVFTGIDRGEFLTLVASAEASSEHPLGKAILQYARHFHFFDPTNGTQNNAKESGWLYDVSDFSAIPGKGVQCFINGKRILSCLLEAVCPEQVGNRKLLVESGIDISTEVENFVIELEESAKTGILVAFDDVLTGVLGVADPLKREASVVIEGLKKMGIIPVMVTGDNWRTARAVAKEVGIEDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIVVN.	1012

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g05622	1011	Gene3D	-	765	816	IPR023299	GO:0000166
	Seca11g05622	1011	Gene3D	-	666	762	IPR023299	GO:0000166
	Seca11g05622	1011	FunFam	Copper-exporting P-type ATPase A	125	193	-	-
	Seca11g05622	1011	MobiDBLite	consensus disorder prediction	1	20	-	-
	Seca11g05622	1011	Pfam	haloacid dehalogenase-like hydrolase	655	899	-	-
	Seca11g05622	1011	NCBIfam	copper ion binding protein	128	190	IPR006122	GO:0005507
	Seca11g05622	1011	NCBIfam	copper ion binding protein	42	105	IPR006122	GO:0005507
	Seca11g05622	1011	Gene3D	-	39	110	-	-
	Seca11g05622	1011	Pfam	E1-E2 ATPase	431	638	-	-
	Seca11g05622	1011	FunFam	Copper-exporting P-type ATPase A	38	108	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g05622	Seca-Chr11	155573725	155579619	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g05622	1	1008	Primary Pumps ATPases	AT5G44790	72.665	0.0	1473

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g05622	K17686		-	gmx:100798164	1651.34

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