Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05617 ATGAGCAGAGACATGAATGTGATGCCAGCATGGTTAAAGAAGCTTATGGCTGAGACATTCTTTAGTAGTTGTGGGGTCCACCAGGATCTCAAGAAGAATAAGGAGAACTTCTTTTGCTTACAATGTTGCCGTAGCATCTGCTCCCATTGCCTCCCTTCTCATGCCTCTCACCCTCTCCTTCAGGTGAGAAAGTGTGTTTACCATGATGTGATTGAATTGAATGATTTGGAAAAGCTCATCGATTGTTCCAATATTCAGCTATATACCAACAATGGAGCCAGAGTGATATTCTTAAACCAGAGGCCACAGTCAAAACCATGCGGAGGCATTGCCAACACTCGCTTTTGTTGTCACAGGAGTCTTCAGGGGCCCATTGACTTCTGTTCTCTCTCATGCAAGGTTTTTATTTCTTTTCTCTATCTCTCTATCATTCTTGTTTGGCCTTTCACTATCATAAACAAATTACTATTCAAGGTCCAAAACTTTAAACTTTTGTCAACATTTTTTTTTAGTGAAGGGAACTTTTCTTTTAATAAAATAAATATATCCATTACTACTTTACTAGGCTTAGTAACTTTTTTTTTACACCTCTGA 594 0.3855 MSRDMNVMPAWLKKLMAETFFSSCGVHQDLKKNKENFFCLQCCRSICSHCLPSHASHPLLQVRKCVYHDVIELNDLEKLIDCSNIQLYTNNGARVIFLNQRPQSKPCGGIANTRFCCHRSLQGPIDFCSLSCKVFISFLYLSIILVWPFTIINKLLFKVQNFKLLSTFFFSEGNFSFNKINISITTLLGLVTFFLHL. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05617 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 133 - -
Seca11g05617 197 Pfam PLATZ transcription factor 63 134 IPR006734 -
Seca11g05617 197 ProSiteProfiles Zinc finger B-box type profile. 24 62 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05617 Seca-Chr11 155515988 155517182 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca11g05617 PLATZ 6.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05617 - - gmx:100806234 206.453