Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05612 ATGGCTTCAAGAGTAGAGACCGATGAAGAGGGTGATAACAAAGGTAGTATGTGGGATTTGGATCAGAAACTTGACCAGCCTATGGATGAAGAGGCAGGAAGGCTCAAAAATATGTACAGAGAAAAAAAATTTTCTGCACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGTGTAGTTTATGGAGATTTGGGCACTTCACCCTTGTACGTATTCTACAATACATTTCCTAATGGTGTAGAGGATCAGGAGGATGTAATTGGAGCTCTTTCTTTGATTATCTATTCTCTTACTTTGGTGCCGCTCCTCAAATATGTTTTTATTGTGTTGAGAGCAAATGATAACGGCCAAGGTGGAACATTTGCGCTTTATTCCTTGCTCTGCCGACATGCAAAGATAAAAACCATTCCCAACCAGCATCGCACTGATGAAGAGCTAACAACATATAGTCGGTCTACCTTCGATGAAAGGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGAATCGTGAATCTAGGAAGAGTGCCATTCTTATTCTTGTCCTTGTTGGCACCTGCATGGTGATTGGAGATGGGATTCTTACCCCAGCTATATCTGATTTCAAGAGATTCATAACCATATCTTCTGTTGTAGTTTTATCAGCTGTTGGTGGCATCAAGTTTATAGGTCTTGAAAAGTTTCTTTCTATTTGGGCTACAGGTGTAGTAGTGCTGGTCGCGGTTGTAATATTAGTTGGTCTTTTCAGTATGCAACATTATGGCACAGATAGAGTTAGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGGGGCATTGGTATATTTAACATCTGGAAGTATGGAAGCAGTGTTCTAAGGGCTTTTTCTCCTGTGTATATTTATCGCTATTTCAAAAGAGGAGGAAAAGATGGATGGACTTCCCTTGGTGGTATCATGCTCAGCATAACAGGGACAGAGGCTCTTTTTGCTGACCTAGCTCATTTTCCAGTCTCATCGGTACAGCTTGCATTTACTGTAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCTTACCTTATGAATAACTTGAGTCATTCACAAGATGCTTTTTATCGTTCTATTCCAGATAGAATATACTGGCCAGTATTTGTTGTTGCAACAGCGGCAGCCATAGTTGCAAGCCAGGCCACAATAACTGCAACTTTTTCAATTATTAAGCAAGCCCTTGCTCATGGATGTTTCCCTAGGGTTAAAGTTGTATATACATCAAAGAATTTCCTTGGCCAGATATATGTTCCAGATATCAATTGGGTCCTTATGATTCTTTGCATTGCGGTTACTGCTGGATTTGAAAATCAAAACCAGATTGGAAATGCATATGGTACTGCAGTTGTGATAGTCATGCTGGTTACAACATTCCTTATGATTTTAATCATGATATTAGTGTGGCGCTGCCATTGGATTCTTGTCTTTGTCTTCACTTGCTTATCATTGATTGTGGAATGCACATACTTCTTCTCAGTACTCTTCAAAGTTGATCAAGGTGGGTGGGTTCCCCTTGCAATTGCTGGAGCATTTCTTGTTATCATGTTTGTCTGGCATTACGGTACATTGAAACGCTACGAGTTTGAAATGCATAGTAAGGTCTCAATGGCATGGATTCTTGGGCTTGGCCCGAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCTCACATCTTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCTGTTGTGGTTTTCGTATGTGTCAAATACCTTCCTGTCTACACAGTCCCAGAAGATGAGAGATTCCTTGTCAAGAGGATTGGACCTAAGAATTTCCACATCTTTCGATGTGTGGCGCGATATGGCTATAAAGACCTGCATAAGAAAGATGATGAGTTTGAGAAGAAACTCTTTGATAACCTTTTCATGTTTGTTCGGCTTGAGTCTATGATGGAAGGATTTTCAGATTCAGATGAATACAGTTTATATGGACAGCAAACACAGCAATCAAGAGATGGCCTATTGAATAACAATGGAAATACAACTTCTTCCAATATGGATTTAACAATTTCCTCAGTAGATTCAATAGAACCAGTTAGATCACCACCACATGTGAATATTACTACTGTAAGGTCCTGTGGTCAAGTAAGTAGCCACACAGAGGTTGATGAACTTGAATTTTTGAATAATTGCAGGGATGCTGGGGTGGTTCACATACTAGGAAACACAATTGTGAGAGCAAGGAGGGACTCAAGGTTCTATAAGAAAATAGCTGTTGATTATATATATGCATTTCTTAGGAAGATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATTTTCTCTGTATAG 2430 0.4012 MASRVETDEEGDNKGSMWDLDQKLDQPMDEEAGRLKNMYREKKFSALLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPNGVEDQEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFDERSFAAKTKRWLENRESRKSAILILVLVGTCMVIGDGILTPAISDFKRFITISSVVVLSAVGGIKFIGLEKFLSIWATGVVVLVAVVILVGLFSMQHYGTDRVSWLFAPIVLLWFLLIGGIGIFNIWKYGSSVLRAFSPVYIYRYFKRGGKDGWTSLGGIMLSITGTEALFADLAHFPVSSVQLAFTVVVFPCLLLAYSGQAAYLMNNLSHSQDAFYRSIPDRIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKNFLGQIYVPDINWVLMILCIAVTAGFENQNQIGNAYGTAVVIVMLVTTFLMILIMILVWRCHWILVFVFTCLSLIVECTYFFSVLFKVDQGGWVPLAIAGAFLVIMFVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDEFEKKLFDNLFMFVRLESMMEGFSDSDEYSLYGQQTQQSRDGLLNNNGNTTSSNMDLTISSVDSIEPVRSPPHVNITTVRSCGQVSSHTEVDELEFLNNCRDAGVVHILGNTIVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFSV. 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05612 809 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 806 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g05612 809 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g05612 809 NCBIfam potassium uptake protein 52 807 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g05612 809 Pfam K+ potassium transporter 54 641 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05612 Seca-Chr11 155459916 155467124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05612 1 809 Inorganic Solute Cotransporters AT1G31120 77.073 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05612 K03549 - gmx:100794454 1364.36