Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05610 ATGATGAAGGAAAACAAATCATCAGCACCTAAAATGCTTAACCGGAACTGGCTTTCAAAGCGCAAGCGGAGAAAGCTTCCTTTAGGAGTGGATCAACCTTCTGGTAAAGAGCAATTTGATGGTAAAGAAGACAATTCAGCGACATCTGAATCTTCTAGGAATGCTTCAGCTAAACGTATGCTAAAGACTGAAGTAGCTTCTGATCAATTTTCATCTAAGAAGAAAGGAAATGACGGGTATTACTATGAATGTGTGATCTGTGATCTTGGTGGCAACTTGTTGTGCTGTGATAGCTGTCCTCGCACTTATCATATACAGTGTCTTAAACCTCCCCTTAAGCGCATTCCTAACGGGAAGTGGCAATGTCCAAGCTGCTTTGAAGGAAATGATCAACTAAAGCCCATAAACCACCTGGATTCAATTTCAAAACGAGCGAGAACAAAGATTGTCTCTGCAAAATCAACAGGTGGAGTTAACTCACTTAACCTGGAAAAAGTTTCTGGAATTTTCGGAAATAAACTTATTTCAAAGAAAAGGTCCTCCAGCAAAGGAAAATCTGTTTCAACTATGGGAGCCAAATTCTTTGGAAAGAAACTGGTGTCTTCCCCAGTAGGTGCAACTTGTAGCGACAAACCAATTGACCCTTCTCCTGGGATCTGCATGGAAGGAACTTCATCATCTGTGGATGTTGATGAAAAGAAATTGAACTTGTCTCCAACAGTCTCCCCGATGGAGAGGACTTCACCTTCACCGACCAAGGAAGTTTTATCTCCCTCTAAAATGACTAACTTAGAAGCAAATGATGAACAGCTGGAGGGGAAGCCTGATTTATCTTGTAATAAAACCCCTTTAAGAAAACAACTTGTTCTTGCTATTGCTGCTGGTGGAGAGGAAGTGAGAAAAAGGAAGCATAAAGTTGTTAGTGACAATACTAGTCAAAAGAAGCGTAGGACTGAAAAGGGGAAAAAATTTGTGAATACTTCTATAAAGTCCAAGTCTGTAAACAATAAAGTACAGAAGAAGCAAAAGTCTATAACCCATAGCCTTTCTGCATCTGTATCAAAAGAAGATGTTGGAAACAAGAGTTCTGATGCCCAGCCGAAAGATGAGGTACTTGTTCTATTCTCTAAATTCTTTTTGTATTTTTATTTTAAGTTCTCTCAGGTAATGAAAGACGCATCAAATGAGCTTGATAAAGCAGGAAGTAATGTGGATGAAACTTTGATGAATGGAGACAATGCTATTGTTGAACCTCTGCAGGTTGACCGGGTTCTAGGGTGTCGAATTCTAGGTGAGAGCACAAACTCATTACGACACTTATCTTTGAACGTTGGGGATGACTCACCTTCTGGCAATCTGGTAATATCAGAAAACCAGACCAGACTAGTAGAGGATAATTCTGCTTGTGATAATGATTTGGATGTTGAATCAGCTGAAAATCTTATTGATGATCCTCAAAATGTTATCAAGAGTCCTGATAAAGAAGGAACATTGAAAAACACTGACAGAGGGGAAAAAATTCATGTATACAGAAGATCGACAACAAAGGAAAGTAAGAAAGGAAATCCCATGGATTCATTAAATAAAGCCACTGATGATTTAGGTTCCTGTGCCAGGGATGGTAAAGATCAGGATGACTCTACTGCATCTGCTGAACAGTTGGAAAAGCCAAATGACAAGGTGGAGAAAGAGGAGAGCATTATTGTTGCTTTAAGAAGTGAGGAGGATAACAGTGAGCTTCCAAAAAATTGTGAAATGCATGTCGCTCATGAAACAAAACAAATTGAAGTGGATATGGAGAAGGGGTTAAGTAGCAGTGTTGATAATAAAGTTCAGGATGCTAATGGAGAGAAAGTTTCCTATGAATTTTTAGTTAAATGGGTAGGAAAGTCTCATGTTCATAATAGTTGGATTTCTGAGTCCCATTTAAAAGTTCTTGCAAAGAGAAAACTGGAAAATTACAAGGCAAAGTATGGGATGGCAATAATAGATATTTGTGAGGAGCGTTGGAAGCAGCCTCAGCGGTTGCTTGCTCTTCGTACTTCCAAACAGGGAAGATCTGAGGCATTTGTAAAATGGACTGGACTACCGTATGATGAATGCACTTGGGAAAGTTTAGATGAACCTGTGCTTCAAAATTCTTCTCATTTGATTACCCTTTTTAATAGGCTCGAAACTCTTACACTGGAAAGGGATGCATCAAAGGAAAATTCAACTAGAAAAAACAATGATCATCAAAATGATATATCTAATCTTGTAGAGCAACCTAAGGAACTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTTGAGGCTCTAAACTGGTTGCGGAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACTGTGTCTGCTTGTGCTTTTATTTCATCATTGTACTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCCTGGTACCTCTTTCCACAATGCCTAATTGGCTTGCTGAATTTTCACTATGGGCTCCAGATGTGAATGTTGTAGAATATCATGGCTGTGCAAAAGCAAGAGCCTTAATTCGCCAGTATGAATGGCATTCAAATGATCCAAGTGGATTGAATAAGAAAACAGAAGCCTATAAATTTAATGTGCTTTTAACAACATATGAAATGGTTCTTGCTGATTCTTCACATTTGCGGGCAGTTCCTTGGGAAGTTCTTGTTGTTGATGAGGGCCATCGACTGAAGAATTCAGGAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCTTTTCAACATCGTGTTCTGTTGACGGGTACCCCTCTCCAGAACAACATTGGTGAGATGTACAACTTGCTTAATTTCTTACAGCCTGCTTCATTCCCTTCTCTATCTTCATTTGAGGAGAAATTTAATGATCTTACGACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCATATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATTCCCCCCAAGACAGAAAGAATGGTTCCTGTTGAATTGTCTTCCATCCAAGCTGAGTATTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGGGTTGCCCAACAATCTATGCTGAACATTGTGATGCAACTGAGAAAGGTCTGCAATCATCCATATCTCATACCAGGAACTGAGCCTGATTCTGGATCTGTTGAATTCCTCCATGAAATGAGAATAAAGGCTTCGGCTAAGTTGACTCTTCTGCATTCTATGCTAAAGATTTTACATAAGGAAGGTCATAGAGTTCTTATTTTCTCACAAATGACAAAGCTTCTGGACATCCTGGAGGACTATTTAAACATAGAATTTGGGCCTAAAACTTATGAGAGAGTGGATGGCTCTGTTTCTGTAGCTGATCGTCAGGCAGCAATTGCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACCCGCTCCTGTGGACTTGGGATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCTCATGCAGATATCCAAGCAATGAATCGAGCACACAGAATTGGGCAATCAAATAGACTTTTGGTATACCGACTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGATCAACTTTTTGTAAATAAGTCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAATGGGGAACTGAAGAACTCTTCAGTGATTCTCCTGGCCTGAATGGGAAAGATATAAGTGATAATAGTAACAATAACAAAGATGAGGCAGTAGCAGATATAGAACATAAGCATCGGAAGCGGACTGGTGGTCTTGGAGATGTATATAAGGATAAGTGTACTGATATAAGCAGTAAGATCCTTTGGGATGAAACTGCTATTTTAAAATTGCTTGACCGTTCGAACCTTCAGGATGGTTCAACCGATATAGCTGATGGAGATTCTGAAAATGATATGCTGGGCTCAGTGAAGGCCCTTGAATGGAATGATGAACCAGCTGAAGAAAACGTAGTGGGTGAATCTCCTCCTCATGGGACTGATGATATGTGTACACAAAATCCTGAGAAGAAAGAGGATAATGTGGTGGTTGGAAATGAAGAAAATGAATGGGACAGACTATTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAAGCAGCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTGTTTCTTACAGGGAAGTATATGCTCCACACCCAAGTGAAACAATGAGTGAGAGTGGCGGTGAAGAGGAAAAAGAGCCGGAACCAGAGCCTGAGCGTGAATACACACCAGCAGGACGGGCCCTGAAGGCAAAATTTGCTAAACTCCGTGCTCGGCAGAAGGAACGACTTGCTCAGAGGAATGCGGTTAAAGAGTCACATCCTGCTGAGGGACTTCCAGGTACTGAGTCACTCATGCATTCTCCAGCCGTTGCCAAGGGTGGGGATCTAGGAGCTGGACCGACGCATTCAGTTCAAGAGGGGCCTTCTATGAACATAGAGGACAGCAAACATACTCAGCTTTCAGAAGCTCAAACTAGCAACACTGACTACTTACCAAGGATCGACAAGCTTTCAAAACAGAAAATGAGCAGTCACTTTGATGTCTGTGTCAATAATCCAGGCCGTTCTCTACCTGACATTTTCATTCCAAATAACCATAATAAAGTGGGGCTTAACCACAATATGTTGCCTGTTCTGGGACTTTGTGCTCCTAATGCTAACCAAATGGAATCATCAGAAAGTAACATTTCAAAGTTAAATTGGAGACAAAATAGACATGGAGCCAGACAAGAGTTTCCATTCAGCCTTGCCCCTTGCTCTGGAACATTCGTGGATGCTGATGTCAGAAATAAGGAAAAGGCAGCAAATACCAAACTGTCAGATGCATCACCTGAAAATTTACAACAAAGTTTGAAAAATAGCATCCCTGATAACAGTCTCCCATTTGTTCCATTTCCACCCTTTGTGCACGGAAAGGAATCTGATGCATTTGAAAATTCAAGTGCTAGATTCTCTGCTTTCCAGGAGAAAATGGTCCTTCCAAACCTGCCATTTGATGAAAGGTTGCTGGGGAGATTTCCACTCACAACTAAGAGCATGCCAAATTCACATCTGGACCTCTTACCTAATTTGTCATTAGGAGGCAGACTTGAACCTTTAAATGGATCTATGCAAGAACTTCCAACAATGCCAGCATTACCTACTTTCAAAGTACCCCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTGCCTCCCACCCTGGGTTTGGGGAAAAGGCCAACCACATTCTCGTCTTTTCCAGAAAACCATAGAAAGGTGCTTGAAAATATAATGATGAGAACTGGATCTGGATCAAGTAATTTATTGAAAAAGAAGTCAAAATCAGATGGGTGGTCTGAAGACGAACTTGATTGCCTCTGGATTGGTGTTCGTAGGCATGGAAAGGGTAATTGGGATACCATGCTCAGAGATCCGAAGTTAAGGTTTTCGAAGTATAAAACACCTGAAGATTTATCAGCAAGGTGGGAAGAGGAGCAAATAAAGGTCTTTCAGGGGCCAGCCTTTCCGGTGCAAAGATCATCCAAGACAAAGTCTACCAAATCTGCACATTTTCCAATCTCTGATGGAATGATGGAAAGGGCCTTGCATGGGAGCAAATTTCTTTTGCCACCAAAATTTCAAAACCATCTGACTGACATGAAATTAGGCATAGGTGATTCTGTATCTAGTCTGCCACATTTTGGAACATCGGATCGACCCAGTTCGCAAAATGATCACTTAGCACCTCTTGCATCTTGGAGTTACGACATAAACAGAGGAAAATTTCCTGAAGATGCTGCTGCTGAAACATCTGGTAGACCAGGAACTTCTTCCAATGTACCTACTGAAAGACCATTTCTGCTCAATTCTCTTGGAACCAGCAGTTTGAGTTCTTTAGGTTTGAATTGCTCTGGCAGCATTGATTTACAGCAAAAGGAGGATGACCAAGGAAACACCAAGTGTGGAAAGTTGCCTGTACTTCTGGATGGATCACCCAATGACGTGCTTGACAATCGCATTAATGTAGGAAATGGTGAATCTACTAGCTCAGGATTGTTATCTAACCCCATTAGACCTGATCTTTTGCACTCAAAAGGGGAGGAAGTAGCAGGAACCAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTGACCAAACCTCCTGAGCCTGAACTGCCACCCACTGTATCAGCTATTGCTCATTCAGTTCGCATGCTATATGGAGAAGATAAGCCTACAATTCCTCCATTTGTGATTCCAGGTCCACCTCCCTCCCTACCAAAGGATCCCAGGTGTAGTCTCAAGAGAAAGAGGAGAATACACAAGCCCAAGCGGAGTCTTGCTGGAACCAGCAAGGACTTTAACAGCAGCCACCATGTTGATAACGGTACTTCGAGCTCAACTCCCTTAGGTCCACCACTTCCTCTACCACCTCAGACAGGAACTCTAGGACCTCAGCAGATTGAATCTGACCTTAACTTGCCTCCTCTAAATTTGAAAGTGGGAAACTCATCAGTGCACCAATCAAAAAAGGCAAGCTCAGGACTGTCTCCTTCTCCTGAAGTGCTCCAGTTGGTTGCATCCTGCATTGCTCCTGGCCCGCACCTTCCATCAATTCCCAGTTCTTCAAGCTTTCTTGAGAGCAAGCTTCCATTGCCAAGGCCTGTTGCCAGAGCTAAATTCAAAGACTCAGAAGGCACCTTCAGAAACAACAAGCCTAGGCAGATTTCACCAAAAATTTGGTGTTCACCTCAAGAGCATCAAATAGAAAACATTGATAGTGGAGATTCCAGCAAGACTCAGTCAGATCCCTCCCGGGTTGACCGGCCTGATGAAGTGGAGGAGTTATCATCTGAAGGAACTGTCTCAGATCATGCTGTGAGAGATCAGGAAACATAA 7014 0.4157 MMKENKSSAPKMLNRNWLSKRKRRKLPLGVDQPSGKEQFDGKEDNSATSESSRNASAKRMLKTEVASDQFSSKKKGNDGYYYECVICDLGGNLLCCDSCPRTYHIQCLKPPLKRIPNGKWQCPSCFEGNDQLKPINHLDSISKRARTKIVSAKSTGGVNSLNLEKVSGIFGNKLISKKRSSSKGKSVSTMGAKFFGKKLVSSPVGATCSDKPIDPSPGICMEGTSSSVDVDEKKLNLSPTVSPMERTSPSPTKEVLSPSKMTNLEANDEQLEGKPDLSCNKTPLRKQLVLAIAAGGEEVRKRKHKVVSDNTSQKKRRTEKGKKFVNTSIKSKSVNNKVQKKQKSITHSLSASVSKEDVGNKSSDAQPKDEVLVLFSKFFLYFYFKFSQVMKDASNELDKAGSNVDETLMNGDNAIVEPLQVDRVLGCRILGESTNSLRHLSLNVGDDSPSGNLVISENQTRLVEDNSACDNDLDVESAENLIDDPQNVIKSPDKEGTLKNTDRGEKIHVYRRSTTKESKKGNPMDSLNKATDDLGSCARDGKDQDDSTASAEQLEKPNDKVEKEESIIVALRSEEDNSELPKNCEMHVAHETKQIEVDMEKGLSSSVDNKVQDANGEKVSYEFLVKWVGKSHVHNSWISESHLKVLAKRKLENYKAKYGMAIIDICEERWKQPQRLLALRTSKQGRSEAFVKWTGLPYDECTWESLDEPVLQNSSHLITLFNRLETLTLERDASKENSTRKNNDHQNDISNLVEQPKELKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFSLWAPDVNVVEYHGCAKARALIRQYEWHSNDPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRAVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFSDSPGLNGKDISDNSNNNKDEAVADIEHKHRKRTGGLGDVYKDKCTDISSKILWDETAILKLLDRSNLQDGSTDIADGDSENDMLGSVKALEWNDEPAEENVVGESPPHGTDDMCTQNPEKKEDNVVVGNEENEWDRLLRVRWEKYQSEEEAALGRGKRQRKAVSYREVYAPHPSETMSESGGEEEKEPEPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAVKESHPAEGLPGTESLMHSPAVAKGGDLGAGPTHSVQEGPSMNIEDSKHTQLSEAQTSNTDYLPRIDKLSKQKMSSHFDVCVNNPGRSLPDIFIPNNHNKVGLNHNMLPVLGLCAPNANQMESSESNISKLNWRQNRHGARQEFPFSLAPCSGTFVDADVRNKEKAANTKLSDASPENLQQSLKNSIPDNSLPFVPFPPFVHGKESDAFENSSARFSAFQEKMVLPNLPFDERLLGRFPLTTKSMPNSHLDLLPNLSLGGRLEPLNGSMQELPTMPALPTFKVPPEDLFRYNQQDRDVPPTLGLGKRPTTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSKSDGWSEDELDCLWIGVRRHGKGNWDTMLRDPKLRFSKYKTPEDLSARWEEEQIKVFQGPAFPVQRSSKTKSTKSAHFPISDGMMERALHGSKFLLPPKFQNHLTDMKLGIGDSVSSLPHFGTSDRPSSQNDHLAPLASWSYDINRGKFPEDAAAETSGRPGTSSNVPTERPFLLNSLGTSSLSSLGLNCSGSIDLQQKEDDQGNTKCGKLPVLLDGSPNDVLDNRINVGNGESTSSGLLSNPIRPDLLHSKGEEVAGTSTSKDKLPHWLREAVTKPPEPELPPTVSAIAHSVRMLYGEDKPTIPPFVIPGPPPSLPKDPRCSLKRKRRIHKPKRSLAGTSKDFNSSHHVDNGTSSSTPLGPPLPLPPQTGTLGPQQIESDLNLPPLNLKVGNSSVHQSKKASSGLSPSPEVLQLVASCIAPGPHLPSIPSSSSFLESKLPLPRPVARAKFKDSEGTFRNNKPRQISPKIWCSPQEHQIENIDSGDSSKTQSDPSRVDRPDEVEELSSEGTVSDHAVRDQET. 2338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05610 2337 Gene3D - 998 1225 IPR027417 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2119 2223 - -
Seca11g05610 2337 Pfam Helicase conserved C-terminal domain 1083 1194 IPR001650 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 240 260 - -
Seca11g05610 2337 ProSitePatterns Zinc finger PHD-type signature. 84 125 IPR019786 -
Seca11g05610 2337 Gene3D - 662 723 - -
Seca11g05610 2337 Pfam Chromo (CHRromatin Organisation MOdifier) domain 672 722 IPR023780 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 300 326 - -
Seca11g05610 2337 CDD SANT_TRF 1820 1864 - -
Seca11g05610 2337 SMART chromo_7 417 659 IPR000953 -
Seca11g05610 2337 SMART chromo_7 669 726 IPR000953 -
Seca11g05610 2337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1242 IPR027417 -
Seca11g05610 2337 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 776 953 IPR014001 -
Seca11g05610 2337 Pfam CHD subfamily II, DUF1087 1381 1418 IPR009463 -
Seca11g05610 2337 Pfam PHD-finger 84 125 IPR019787 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2186 2223 - -
Seca11g05610 2337 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1083 1242 IPR001650 -
Seca11g05610 2337 Gene3D - 583 658 - -
Seca11g05610 2337 SMART DUF1087_2 1363 1424 IPR009463 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2266 2337 - -
Seca11g05610 2337 Gene3D - 755 997 IPR038718 -
Seca11g05610 2337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 127 IPR013083 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 327 360 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 238 260 - -
Seca11g05610 2337 Pfam SNF2-related domain 782 1057 IPR000330 GO:0005524|GO:0140658
Seca11g05610 2337 ProSiteProfiles Zinc finger PHD-type profile. 81 128 IPR019787 -
Seca11g05610 2337 ProSiteProfiles Chromo and chromo shadow domain profile. 597 657 IPR000953 -
Seca11g05610 2337 Coils Coil 735 755 - -
Seca11g05610 2337 Gene3D - 1792 1892 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 1510 1530 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 1400 1416 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 300 364 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 1 74 - -
Seca11g05610 2337 SUPERFAMILY Chromo domain-like 663 709 IPR016197 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2120 2134 - -
Seca11g05610 2337 CDD CD2_tandem 670 723 - -
Seca11g05610 2337 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 186 2239 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2275 2306 - -
Seca11g05610 2337 SMART PHD_3 83 126 IPR001965 -
Seca11g05610 2337 SUPERFAMILY FYVE/PHD zinc finger 78 128 IPR011011 -
Seca11g05610 2337 SMART helicmild6 1109 1194 IPR001650 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 24 47 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 495 523 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 1348 1369 - -
Seca11g05610 2337 SMART ultradead3 760 964 IPR014001 -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2307 2337 - -
Seca11g05610 2337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 735 988 IPR027417 -
Seca11g05610 2337 CDD SF2_C_SNF 1078 1205 - -
Seca11g05610 2337 ProSiteProfiles Chromo and chromo shadow domain profile. 671 733 IPR000953 -
Seca11g05610 2337 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 998 1225 - -
Seca11g05610 2337 CDD PHD2_CHD_II 84 125 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 535 564 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 1400 1530 - -
Seca11g05610 2337 CDD CD1_tandem 588 655 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 477 564 - -
Seca11g05610 2337 MobiDBLite consensus disorder prediction 2154 2174 - -
Seca11g05610 2337 SUPERFAMILY Chromo domain-like 621 660 IPR016197 -
Seca11g05610 2337 SUPERFAMILY Homeodomain-like 1819 1865 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05610 Seca-Chr11 155408556 155426265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05610 744 1237 RAD5 or RAD16-like Gene Family AT1G02670 26.712 9.48e-36 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Seca11g05610 SNF2_N 1.4e-57 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05610 - - gmx:100793933 3722.55