Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05599 ATGGTCAAGCTGATCTTTCTCATTTGTCCAGGTACTTTACTGGTCTGTTATCACCATGGAAGGGCATTCTCCTTTTTGGCCCCCCTGGGACAGGAAAGACAATGCTTGCAAAGGCTGTTGCAACGGAGTGCAAGACTACATTTTTTAATATTTCAGCATCTTCTGTTGTCAGCAAATGGCGAGGCATGTTACAACAACTTCCCCCCTCCTTTCCAGAGTATTTATGTTTCATATGTAAATCTTAACCTCGGTGATTCGGAGAAGTTAGTGAAGGTATTGTTTGAGCTTGCAAGGCATCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATCATTAGCCAACGTGGTGAAGCTCGCAGTGAACATGAAGCAAGTAGACGGTTAAAAACCGAGCTACTGATTCAGATGGATGGTTTGGCACGGACAGATGAGCTTGTTTTTGTTTTGGCGGCAACAAACCTTCCCTGGGAATTGGATGCGGCCATGCTCCGACGTCTTGAGAAGCGAGTATCCTTCCAATATAAGCTTATGCTTAATGTTCATGATATCTGA 558 0.4355 MVKLIFLICPGTLLVCYHHGRAFSFLAPLGQERQCLQRLLQRSARLHFLIFQHLLLSANGEACYNNFPPPFQSIYVSYVNLNLGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLARTDELVFVLAATNLPWELDAAMLRRLEKRVSFQYKLMLNVHDI. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05599 185 PANTHER AAA DOMAIN-CONTAINING 82 172 - -
Seca11g05599 185 Pfam ATPase family associated with various cellular activities (AAA) 82 175 IPR003959 GO:0005524|GO:0016887
Seca11g05599 185 Gene3D - 79 173 IPR027417 -
Seca11g05599 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05599 Seca-Chr11 155227818 155231102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05599 27 185 Calmodulin-binding Proteins AT3G56690 31.677 4.57e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05599 K07767 - egt:105951362 171.785