Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05588 ATGGCTGCTCCTCTTATTGTACGAAACCCCACTTTCCACACCCTTCGTTCTCACACTCACCAAAACAAACACTTCACTGCATCCTCTTCCTTCAAGGCCAAATCACTTTCCCTCCGCAATTTTGCTAAGATGGAAGGAAGTGAAATCACTGAGCAAGTGGCAGAGAAAGCAGGGGAGGATTTGGGTGTGAAGAAGAAAATTTTTGTTGCTGGAGCTACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTACTAGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTAGAGACTTGGACAAGGCGAGGACCACCCTCTCCTCTGCCAACCCATCTCTTCAAATTGTTAAAGCCGATGTCACAGAGGGTTCTGACAAGCTAGCTGAAGCCATTGGCAATGATTCAGAAGCAGTAGTATGTGCCACAGGCTTTCGGCCAGGGTGGGATTTGCTTGCTCCATGGAAGGTTGACAATTTTGGCACAGTGAACCTTGTTGAAGCATGCAGGAAACGTAATGTTAACAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCAGCTATGGGACAGCTACTCAATCCAGCTTACATCTTTCTCAATGTTTTCGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATCATATTAGGAAATCCGGTATAAATTACACAATAATAAGACCTGGTGGGTTGAGAAACGATCCTCCTACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGCACCATATCCAGAGATCAAGTTGCAGAAGTAGCTGTGGAAGCACTTGCTTTTCCTGAGGCTTCTTACAAAGTTGTGGAGATAGTTTCTCGCCCTGACGCTCCTAAGCGCTCATACCATGATCTTTTTGGTTCCATAAGGCAACGATGA 900 0.4511 MAAPLIVRNPTFHTLRSHTHQNKHFTASSSFKAKSLSLRNFAKMEGSEITEQVAEKAGEDLGVKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKARTTLSSANPSLQIVKADVTEGSDKLAEAIGNDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGTISRDQVAEVAVEALAFPEASYKVVEIVSRPDAPKRSYHDLFGSIRQR. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05588 299 PANTHER FLAVIN REDUCTASE-RELATED 48 297 - -
Seca11g05588 299 Gene3D - 52 287 - -
Seca11g05588 299 CDD SDR_a5 66 281 - -
Seca11g05588 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 65 280 IPR036291 -
Seca11g05588 299 Pfam NAD(P)H-binding 71 267 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05588 Seca-Chr11 155067336 155070320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05588 64 196 Monolignol Biosynthesis Gene Families AT2G33590 33.099 1.02e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05588 - - gmx:100792523 482.641