Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05585 ATGCAGACTCATGATTATTTTCTCCCGGAAGAGGTGGTACTTCCTTTGGCAGATGAAGCCATTGATACTTATATGCATGCCCCTCTTGCTTCTGCCTTTGATGCAGTTTTACCTCCAGGTGTGAGGCAGATGACACCTTTTGAAAAATTTAAACTGCAGCCCTCTGAGGCTTGCCCTAAGAATTTCATTATTTTTGATCAGACAGATCAACGAAGCAGCATTATGTTCCATCCTGCAATGACCTACAAATTTAATGGTTCCGGCTTAAATGTTCATGCTCCTTGTACTCAAGATTTTGAAAAGAATAAAGTTAATCAAATGGAAAGAGAATTGTCATCTCCTTTTGAAGAGGATTCTGATGACATTGATGCATTGTTGAGCTTAGAAGTGGATGAACTAGAAGACTTTGATGAGGAAGAAGTCAGCACAGCAAGGACTCATGAAAATTATGAAAGTACATCTGATACTTGCTCCAGTTATTGGTCAAAATCAAGGAAGAAGAGGTTGTCATCACCTTCGGTACAAAAGTCTTCTGGAACCAGGGGATACTGCAACAATGAAAGGAAACACCGGGAGATGAAGAGGATGGTGAGGATGTTGAGAAGGATTGTGCCTGGTGGAGGTAACCAAATGGATGCTGTTACTGTTTTAGACGAAGCTGTTAAATACCTTAAGTCTCTCAAGGTTGAAGTTGAGCAATTCGGAGTTGGACCATGA 717 0.4086 MQTHDYFLPEEVVLPLADEAIDTYMHAPLASAFDAVLPPGVRQMTPFEKFKLQPSEACPKNFIIFDQTDQRSSIMFHPAMTYKFNGSGLNVHAPCTQDFEKNKVNQMERELSSPFEEDSDDIDALLSLEVDELEDFDEEEVSTARTHENYESTSDTCSSYWSKSRKKRLSSPSVQKSSGTRGYCNNERKHREMKRMVRMLRRIVPGGGNQMDAVTVLDEAVKYLKSLKVEVEQFGVGP. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05585 238 PANTHER TRANSCRIPTION FACTOR BHLH145 28 236 IPR037546 -
Seca11g05585 238 MobiDBLite consensus disorder prediction 163 190 - -
Seca11g05585 238 MobiDBLite consensus disorder prediction 163 182 - -
Seca11g05585 238 Gene3D - 184 235 IPR036638 GO:0046983
Seca11g05585 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 233 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05585 Seca-Chr11 155013552 155014268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05585 16 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 40.417 1.68e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05585 - - gmx:100791998 369.392