Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05537 ATGGATTCAGTAGCTTCTGGGTTGTTGGCCACTATGTTGGACAGGCTAGCAACCACTGCTTTTAGGAACATTTCCATGGCAAGGGGTCTCCAAGTTGATGTGGGCACCCTCCAAGAATCTCTCACACTCATCGGTGCCTACATTATGGATGCTGAGAACAAGCAAACCCAACACCAATCCATATTGCTCTGGCTGCAACAACTCAAAGAAGCTTTCTTTGATGCCAGTGACATCTTGGATGAGATTGAGTGTGAGGCTCTTAGGAATCAAGTTGTGAACAGACATGGAGGCTTCACCACAAAGGTACAACGTTTTTTCTCATCTTCTAACCCTTTTGTATTTCGTGTTAAGATGGCCCACAAGATCAAGGACATTAAGGAGAGGATAGATGAAATAGCTACTCTTAGGATGAAATTGGGTCTCCCAGTGATCCCTGAAAGTAGTACTAGTGTGTCACTCCATCAGAACATGGCTTGGAGAGAGACCCATTCTTATGTTAGGCCTTCCCTTGTGATTGGTAGAGATGAGGAGAAAGAAAAGATCATTGGGTCTTTGATGGTTCCACCATCTGATAGTGATGGAATTGATGTTATTCCTATTGTTGGAATTGGAGGATTGGGGAAGACCACACTTACCCAATTAGTGTACAATGATGAAAGGGTCATTGAGCATTTTAATTTGCGTATGTGGGTGTTTGTTTCTGATGATTTTGATGTTAAGAGGTTAGTACTAGAGATTATTAAAGCTATGCAAGGAACAGATGTAGTAGATGCTCACAACAAAAGCTTTGATCAATTACAAAATCTACTTCGTGAGGGATTATGTGGGAGAAATTTTCTACTTGTTCTAGATGACGTGTGGAATGAAGATTATAGAGAATGGCTTCAATTGAGAAATCTTTTAGTAGGTACACATGATAAAGATAACAAATTTGGTAACAAGATTATCACAACCACTCGTAGTGACAAAGTTGCTTCAATAATGGGGAATGTTTATAAACACAACTTGAAATATCTCCCTGAGGAAGATTGTTTAAAGCTATTTGTTAAGTGTGCATTTCCGGCAGGAGAGGAGAAAAAGCACCCAAGGCTTCTAGAAATTGGGAAGGATATTGCTAGAAAGTGCCAAGGGTTGCCCTTGGCAGTGGTAAGTTTAGGGTACCTGCTTTACTCAAAACCTGGAGAAAATGAGTGGAAGAAAATAAGAGATAGTGAAATTTGGAAGATGAACCAACAAGATGATGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGCCATCTAGATTGAAACAATGTTTCTCTTATTGTTCAATATTTCCTAAGGGTTATCACTATACTAATCTAGAGCTGATTTCATTTTGGATGGCACATGGACTACTACAAACCAAAGATGAAGATGAAGAGCCGGAAGAACTTGGGGAGATTTATATTAAGGAGTTGGTTTCAAGATCTTTCTTTGAAGCTGTCCCTGAAGAACTAGTAGTTATTGATGGTCTTATTTTTGAAGAACTTGAGCTTCTTGGCATCTCTTTTTTCAAAATGCATGATCTTGTTCATGACCTTGCTGTGTCCACAATGCCAAATGAAAGGGCAGTAGTAAAATTTAATACAGCAAATGTTAAAGAAAAGGTGCAACATGTATCATTTTCAGACAGTGGTGAAGGAGTTCCTACTTTTGGTCAAGTATTGAATAAGGTCCGAACCATTGGATTCTGGCATGTAGGTCAAAAAGCATATGCAATTACTGAGCCATTTGTCAGATGGATCTCCAAGGAATTCAAGTACCTCAGGGTGTTGAATATACAAGGTTCAAATTTTCAGTTCTTGCCAGATTGTTTCAACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGTCAGAGGATGAAAAAACTCCCAGATTCCATATGCAAGCTCCAAAGCCTAGAGGTTTTAAATCTCTGTAGATGTGTAGCACTCAAACATATTCCCAAAAAATTGAGGAATCTTGCCAGTCTTCGGATTTTGTGGATTACCACACAAGACACTGATTTGTCTTATATAGGTATTGGGAGCTTGAAATATCTACAAACTTTAATTTTGTGGAATTGTGAAAATTTGGTTTTTCTTCCACGTGATTTGAGGCACTTGACTGCTTTAAAGAGGCTGACTATTGAGTCTTGTGATGAGGTCATTAGTTTTGAGGATGAAGGAGAAGAAGAAAATGGAAACTACTCCTTGAAACTCGAACGATTTTCAATTGATAAATTACCCAATTTAGCAGCATTACCTGGTTGGCTTAGAAGATCTGGTAAAACTTTGAGATACATGGGTCTTTCAGAGTGTCCAAGCTTAACAGCATTGCCAGAATGGTTGCCAAACCTAACATCACTTGAGACTCTTCTCATTGGTGATTGTCCAAACTTGACACTACCCCAGCGTATGGATCGTCTTCAAAGCCTTCAGAACTTGAAGATATACGGATGTCCTCAGCTAGTTGAGAGATGTAAACGATATACAGGCCTTGACTGGCCCAAAATAGCTCATATCCCAAATGTTGATGCGCAATCCAATTTGGATATGTTAGAGTTCACTATTGACAACTTTGAAATATATGCTGAATTTAGGTGCAATCCTTAA 2628 0.3893 MDSVASGLLATMLDRLATTAFRNISMARGLQVDVGTLQESLTLIGAYIMDAENKQTQHQSILLWLQQLKEAFFDASDILDEIECEALRNQVVNRHGGFTTKVQRFFSSSNPFVFRVKMAHKIKDIKERIDEIATLRMKLGLPVIPESSTSVSLHQNMAWRETHSYVRPSLVIGRDEEKEKIIGSLMVPPSDSDGIDVIPIVGIGGLGKTTLTQLVYNDERVIEHFNLRMWVFVSDDFDVKRLVLEIIKAMQGTDVVDAHNKSFDQLQNLLREGLCGRNFLLVLDDVWNEDYREWLQLRNLLVGTHDKDNKFGNKIITTTRSDKVASIMGNVYKHNLKYLPEEDCLKLFVKCAFPAGEEKKHPRLLEIGKDIARKCQGLPLAVVSLGYLLYSKPGENEWKKIRDSEIWKMNQQDDGILAALKLSYNHLPSRLKQCFSYCSIFPKGYHYTNLELISFWMAHGLLQTKDEDEEPEELGEIYIKELVSRSFFEAVPEELVVIDGLIFEELELLGISFFKMHDLVHDLAVSTMPNERAVVKFNTANVKEKVQHVSFSDSGEGVPTFGQVLNKVRTIGFWHVGQKAYAITEPFVRWISKEFKYLRVLNIQGSNFQFLPDCFNKMKHLRYLDLSYCQRMKKLPDSICKLQSLEVLNLCRCVALKHIPKKLRNLASLRILWITTQDTDLSYIGIGSLKYLQTLILWNCENLVFLPRDLRHLTALKRLTIESCDEVISFEDEGEEENGNYSLKLERFSIDKLPNLAALPGWLRRSGKTLRYMGLSECPSLTALPEWLPNLTSLETLLIGDCPNLTLPQRMDRLQSLQNLKIYGCPQLVERCKRYTGLDWPKIAHIPNVDAQSNLDMLEFTIDNFEIYAEFRCNP. 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05537 875 PANTHER DISEASE RESISTANCE PROTEIN RP 59 822 IPR044974 GO:0006952
Seca11g05537 875 Gene3D - 156 333 IPR027417 -
Seca11g05537 875 Gene3D Ribonuclease Inhibitor 581 766 IPR032675 -
Seca11g05537 875 Gene3D Ribonuclease Inhibitor 767 838 IPR032675 -
Seca11g05537 875 PRINTS Disease resistance protein signature 616 632 - -
Seca11g05537 875 PRINTS Disease resistance protein signature 197 212 - -
Seca11g05537 875 PRINTS Disease resistance protein signature 273 287 - -
Seca11g05537 875 PRINTS Disease resistance protein signature 375 389 - -
Seca11g05537 875 Pfam NB-ARC domain 175 425 IPR002182 GO:0043531
Seca11g05537 875 SUPERFAMILY L domain-like 515 843 - -
Seca11g05537 875 Gene3D - 338 428 IPR042197 -
Seca11g05537 875 Pfam Rx N-terminal domain 9 98 IPR041118 -
Seca11g05537 875 Gene3D - 9 123 - -
Seca11g05537 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 438 IPR027417 -
Seca11g05537 875 FunFam Probable disease resistance protein At1g61300 153 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05537 Seca-Chr11 154074479 154077219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05537 195 828 WRKY Transcription Factor Family AT5G45050 22.661 8.19e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05537 - - mtr:25493373 1264.6