Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05528 ATGAGTGTGTGGGTCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTGTTCTGGGGTGATATGCTCTGGAATGGCATACTATGTACAAGGGGTTGTGACCAGGGAACGTGGACCAGTGTTTCTAACATCTTTCAGTCCAATGTGTATGATTATCACTGCTGCATTGGGTTCACAGATGCTTCAATCACAGCTAGCTTCTAAGAAATTGTTCCATGACTTAATTGCTTATCTGTAA 237 0.4346 MSVWVIGWDSRLLACVCSGVICSGMAYYVQGVVTRERGPVFLTSFSPMCMIITAALGSQMLQSQLASKKLFHDLIAYL. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05528 78 PANTHER WAT1-RELATED PROTEIN 4 66 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05528 Seca-Chr11 153972314 153973086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05528 1 65 Nodulin-like Gene Family AT1G21890 61.538 5.25e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05528 - - gmx:100811114 117.087