Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g05506 | ATGTGCAACATCTTTGGCACAATTATGAACAACTATCAAGGTGATTTAACTGACATAATCCGTGCATCTTATGGCAGCTTCAGCACAGGCACTGAAGCTGCTCCCTTCTTTTGCGATCATCACTGGCAATTCTCTTCTGTTTTGGAGGAAGACCCTAGTTGCAGCTTTGGTGATCCATTCTCAAACATGAGAGACCCCTTTCTACATGAGCTTGATATGCTGCCTAATGGTTCTGCCTACTTTAACAGTACTTCTGGGGAATTGATGAAAGAAGCAGCTTGTTTTGGTGGTGGTGGTGTTATTACTTCTGTTTTGGCACAAAAGAACATTCTAGAGGATGATATGAGAAGGCCTTGTAACAGCATAATGTCACACATGACTCAGATCTCTCCCAATTCTAAGTTACCAATCTCACCAGCTGATTCAACTGGTAAGATGAATATTATTGCAAAGGCCTCTAAAGATCATTGCTTGGTGGACAACACAGGAGTAGAACAGCAGATCTCAACTCCACGGAATCCGGGTCTTAAGCGAAGGAAGATCCTGGCAAAGAAGTCAATTTATATTCCTGCACCAGCAGCTCCAAACAGCAGACAAAGTGGAGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCCCTATATCCAAGGAGTTATTATAGATGCAGCAGCTCAAAGGGTTGTCCAGCCAGGAAACAAGTTGAAAGGAGCAGAACAGATCCAAACATGTTGGTCATAACTTACTCTTCAGAGCATAACCATCCATGGCCAACTCAGAGAAATGCTCTCGCTGGTACAGCGCGATCCCAATCATCCAAGAATAATATTGTTGCTGCTGCTTCAAAGAATTCAGAAACCACTCAACCCCAAAATGGCACAACAAAGCCAGATGAAGAGAAGCAAGAGACCAACAGTGATGACAGCAATGTGTCCCCAGTGAATGCAGGGAACTCAGCAAACAGTACTGTAAAGGGAGAGATTGAAACGGATGATGGGGAATTCAGTAATGGACTTATCCCTTACAAGCCATCTATTCTGAAGTGCAACCAACTTGAGGACTTGTTTGCAGAATTGGGAGAAATCAAAGCTCACTCACTAAATTACCATCCCTTCTCTTTCACTGATCCAAATATAACTCCACAAGTAACATAA | 1179 | 0.4283 | MCNIFGTIMNNYQGDLTDIIRASYGSFSTGTEAAPFFCDHHWQFSSVLEEDPSCSFGDPFSNMRDPFLHELDMLPNGSAYFNSTSGELMKEAACFGGGGVITSVLAQKNILEDDMRRPCNSIMSHMTQISPNSKLPISPADSTGKMNIIAKASKDHCLVDNTGVEQQISTPRNPGLKRRKILAKKSIYIPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSLYPRSYYRCSSSKGCPARKQVERSRTDPNMLVITYSSEHNHPWPTQRNALAGTARSQSSKNNIVAAASKNSETTQPQNGTTKPDEEKQETNSDDSNVSPVNAGNSANSTVKGEIETDDGEFSNGLIPYKPSILKCNQLEDLFAELGEIKAHSLNYHPFSFTDPNITPQVT. | 393 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g05506 | 392 | MobiDBLite | consensus disorder prediction | 315 | 334 | - | - | |
Seca11g05506 | 392 | FunFam | probable WRKY transcription factor 14 | 179 | 259 | - | - | |
Seca11g05506 | 392 | SMART | WRKY_cls | 205 | 265 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca11g05506 | 392 | ProSiteProfiles | WRKY domain profile. | 200 | 266 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca11g05506 | 392 | Gene3D | WRKY domain | 194 | 267 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca11g05506 | 392 | Pfam | WRKY DNA -binding domain | 207 | 264 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Seca11g05506 | 392 | SUPERFAMILY | WRKY DNA-binding domain | 203 | 266 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Seca11g05506 | 392 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 14 | 375 | IPR044810 | GO:0003700 | |
Seca11g05506 | 392 | MobiDBLite | consensus disorder prediction | 289 | 303 | - | - | |
Seca11g05506 | 392 | MobiDBLite | consensus disorder prediction | 289 | 340 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g05506 | Seca-Chr11 | 153602698 | 153607891 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g05506 | 1 | 375 | WRKY Transcription Factor Family | AT1G30650 | 42.752 | 1.51e-78 | 246 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Seca11g05506 | WRKY | 6.6e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g05506 | - | - | gmx:102669548 | 424.861 |