Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05487 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGATTCCTCTTCTATATCTTCTTCTTCTTCCTCTTCCCTTTCTTCCCTTCTTGATCTCCACCCTTCCACCACCATGGATGACCTCCTCAAGTCCATCTACACTCCTTCCCCTAAAGACACCAAACCCAACGCCATCGAAGATGTCTGGAAGGACCTCATCGTCGGCGCTAACAGACCTCCCGTCGATGTTCCTGCCGTCGCCGGTGAGAAACTGACCCTTGAGATTTTCTTAGCCCAAAACGGTGTCGTTGGAGAAGAGGACGTTACAGGGGTCCTTCCTCCTCCTCATTCTTCTTCTTCTTCCCTTTCCCCTCATTTCCCTCTCCCTCCCCCTCCTTCTTCAGATGTTTCTTCCTCTTCTCTCGCACCAAATGGGATTGCTGCAACATCAACGCCGTCACCGTCGGTAGCTAAGGGAAAGAGAAGGGCTCTTGAGGAACCTGTTGATAAGGCCACTCTTCAGAAACAGAGAAGAATGATTAAGAATAGAGAGTCCGCCGCCAGGTCCAGGGAACGCAAGCAGGCTTACACATCTGAGCTTGAGTATTTGGTTCAGCAGCTGGAGGAAGAGAATGCGCGATTATTGGATGAAGAGGCTGAGATGAAAAAGCAGAGACTTAAGCAGCTCAGAGAGTGCCTCATTCCAATAGTGGAGAAGCCTAAACCAAAAAGGAGGCTTAGGAGATCAAATTCAGCCCAAACATTGTGA 753 0.502 MASSKVVSTNPDLPRDSSSISSSSSSSLSSLLDLHPSTTMDDLLKSIYTPSPKDTKPNAIEDVWKDLIVGANRPPVDVPAVAGEKLTLEIFLAQNGVVGEEDVTGVLPPPHSSSSSLSPHFPLPPPPSSDVSSSSLAPNGIAATSTPSPSVAKGKRRALEEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVQQLEEENARLLDEEAEMKKQRLKQLRECLIPIVEKPKPKRRLRRSNSAQTL. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05487 250 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 219 IPR004827 GO:0003700|GO:0006355
Seca11g05487 250 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 225 IPR043452 GO:0003700|GO:0045893
Seca11g05487 250 SUPERFAMILY Leucine zipper domain 169 220 IPR046347 GO:0003700|GO:0006355
Seca11g05487 250 CDD bZIP_plant_BZIP46 169 218 - -
Seca11g05487 250 MobiDBLite consensus disorder prediction 1 34 - -
Seca11g05487 250 MobiDBLite consensus disorder prediction 132 151 - -
Seca11g05487 250 Pfam bZIP transcription factor 166 221 IPR004827 GO:0003700|GO:0006355
Seca11g05487 250 MobiDBLite consensus disorder prediction 102 162 - -
Seca11g05487 250 SMART brlzneu 165 229 IPR004827 GO:0003700|GO:0006355
Seca11g05487 250 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Seca11g05487 250 Gene3D - 168 226 - -
Seca11g05487 250 Coils Coil 188 227 - -
Seca11g05487 250 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 168 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05487 Seca-Chr11 153233081 153236636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05487 59 246 bZIP Transcription Factor Family AT1G03970 41.538 7.74e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g05487 bZIP_1 9.2e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05487 K14432 - gmx:100101890 215.312