Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05480 ATGGTTAATTTATGCAGTGTTGAAAATGGTGTGAAGCCTGTACTGTTAATGGTAGTGGTCCAGTCTCTATATGCAGTGGTTAATATCTTGTTAAAGGTGGTAGCAGATGATGGAATGAGTTTAAGTGTTCTTAATGCCTACCGTCATGTCTTTTCCTCTGCCTTCATTGTTCCCTTGACTCTCCTCTTTGAAAGTTTTCGTTCAATTATGAGAACTAATTATATCTGCAATTGTTATGGGCATGTGTTCCCCAGGAAAAGCATGCAATACCTTACTGGGAAAGTTCTATTCCAAGCTTTTCTTTGTGGATTATTTGGGGGATCCTTACTACAAAACATCTATGTCAAAGCTTTGGCCTTGATATCTGCAACATATACAACAACCATATTCAACCTCGTCCCAGCTGTTACCTACATCATGGTTGTTTCTTTTAGACTGGAGAAACCAAATCTTGGAACACATGCTGGGAAGGCCAAGTTGCTGGGCACTATAACAGCAATTGGTGGTGCCATGATCCTCACTTTATATGAAGGCAGAAGGATATTCAATTGGTCAATACACGTTGACTTTTTTCAAAATGCAGCACCATCACCAGAGAGTGCCACCTCTGGTTCTCACTTGTGGGGCTTCATGCTAGCTATAGTCGCTCCTGTGATTTACTCATTGTGGTTGATAATCCAGACAAAGATGAGTGAGAAGTTTCCGTGGCACTATTCAATTGCGGCTTTAACCTCTATCATGGCCGCAATCCAATCCATTATATTTGCTCTTTGTACAGAAAGAGATTGGAGCCAATGGAAACTTGACTGGAACTTGAGGCTTTTAGCAGCAGCTTCCTCGGGTATCTTGGTCACTGGGGTGTGTTATCCCCTAATAGCATGGTGTGTGCACTTGAAGGGACCTCTGTTTGTGTCTGCTTTTAGTCCTCTAATGCTTGTGCTAGTGGCCCTAGGTGGATCCTTAGTACTAGATGAGTATATTACCATTGGAAGTCTGTTAGGAGCAGTGTTGATTGTGTGCGGATTGTACATGTTGTTGTGGGGGGAAAGCAAAGAAACAAGGAAGGCAAAGAGTGAGATAGTGTGCGCAAATGTCTCTGTTGAATGTGATTCAATCCAAATTTGCAACCAAAAGGAGCATGACAAGAAGATCAAAGCAAGTGTTGCCCCTTACACATTTTCAAGTGTCAACAATTCTTTAGGCGAAGTTCAACAATTAAAGATTTGA 1227 0.4165 MVNLCSVENGVKPVLLMVVVQSLYAVVNILLKVVADDGMSLSVLNAYRHVFSSAFIVPLTLLFESFRSIMRTNYICNCYGHVFPRKSMQYLTGKVLFQAFLCGLFGGSLLQNIYVKALALISATYTTTIFNLVPAVTYIMVVSFRLEKPNLGTHAGKAKLLGTITAIGGAMILTLYEGRRIFNWSIHVDFFQNAAPSPESATSGSHLWGFMLAIVAPVIYSLWLIIQTKMSEKFPWHYSIAALTSIMAAIQSIIFALCTERDWSQWKLDWNLRLLAAASSGILVTGVCYPLIAWCVHLKGPLFVSAFSPLMLVLVALGGSLVLDEYITIGSLLGAVLIVCGLYMLLWGESKETRKAKSEIVCANVSVECDSIQICNQKEHDKKIKASVAPYTFSSVNNSLGEVQQLKI. 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05480 408 PANTHER WAT1-RELATED PROTEIN 12 357 IPR030184 GO:0016020|GO:0022857
Seca11g05480 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 351 - -
Seca11g05480 408 Pfam EamA-like transporter family 207 346 IPR000620 GO:0016020
Seca11g05480 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05480 Seca-Chr11 153096629 153101047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05480 11 381 Nodulin-like Gene Family AT1G25270 35.215 2.27e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05480 - - psat:127105848 504.982