Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05479 ATGGTTAATTTATGCAGTGTTGAAGCCATAAATGGTGTGAAGCCTGTACTGTTAATGATAGTGGTCCAGTCTCTATATGCAGTGGTAAATATCTTGTTAAAGGTGGTAGTAGATGATGGAATGAGTTTAAGTGTTCTTATTGCCTACCGTTTTGTCTTTTCCTCTGCCTTCATTATTCCGTTGACTCTCCTCTTTGAAAGGAAAAGCATGCAATACCTTACTGGGAAAGTTCTATTCCAAGCTTTTCTTTGTGGATTTTTTGGGGGATCCTTACTACAAAACGTCTATGTCAAAGCTTTGGACTTGATATCTGCAACATATACAACAACCATGTTAAGCCTCATCCCAACTGTTACCTACATCATGGCTGTTTCTCTTAGACTGGAGAAGCCAAATCTTGGAACACATGCTGGGAAGGCCAAGTTGCTGGGCACTATAATAGCAATTGGTGGTGCCATGATCCTCACTTTATATGAAGGAAAAAGGATATTCAACTGGTCAATACACGTTGACTTATTTCAACATGCAGCTCCATCACCAGAGAGTGTCACCTCTGGTTCTCGCTTGTGGGGCTTCGTGGTAGCTTTGGTTACCCCTGTGAGTTACTCATTGTGGTTGATAATCCAGACAAAGATGAGTGAGAAGTTCCCGTGGCACTATTCAATTGCAACTTTAACCTCTATAATGGGCGCAATCCAATCCATTATATTTGCTCTTTGTACGGAAAAAGATTGGAGCCAATGGAAACTTGCCTGGAACTTGAAGCTTTTAGCAGCAGCTTCCTCGGGTATCTTGGTCTCTGGGGTGTGTTATCCCCTATTAGCATGGTGTGTGCAATTGAAGGGACCTCTGTTTGTGTCTGCTTTTAGTCCTCTAATGCTTGTGCTAGTGGCCCTAGGTGGGTCCTTAGTACTAGATGAGTATATTACCATTGGAAGGTGA 942 0.4225 MVNLCSVEAINGVKPVLLMIVVQSLYAVVNILLKVVVDDGMSLSVLIAYRFVFSSAFIIPLTLLFERKSMQYLTGKVLFQAFLCGFFGGSLLQNVYVKALDLISATYTTTMLSLIPTVTYIMAVSLRLEKPNLGTHAGKAKLLGTIIAIGGAMILTLYEGKRIFNWSIHVDLFQHAAPSPESVTSGSRLWGFVVALVTPVSYSLWLIIQTKMSEKFPWHYSIATLTSIMGAIQSIIFALCTEKDWSQWKLAWNLKLLAAASSGILVSGVCYPLLAWCVQLKGPLFVSAFSPLMLVLVALGGSLVLDEYITIGR. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05479 313 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Seca11g05479 313 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020
Seca11g05479 313 Pfam EamA-like transporter family 189 311 IPR000620 GO:0016020
Seca11g05479 313 PANTHER WAT1-RELATED PROTEIN 14 309 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05479 Seca-Chr11 153065487 153069477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05479 13 312 Nodulin-like Gene Family AT1G25270 38.667 1.99e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05479 - - psat:127105848 434.491