Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05478 ATGAAGGGGGAATATAATTTAATGGAAAGACTCAAACCAATCTTACTAATGGTGTTTGTGCAGATTGCATTTTCTGCGGTGAATATCTTCTACAAGCTCGCCATTAATGATGGAATGAGTATGAGGATTGCCACTGCTTACCGTCTCACTTTTGCTTCAGCTTTCACAATCCCCACTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGGATGCTTTTTATGGGATTTCTTTGTGGATTATTTGGGGGAAGTTTATTTCTAAACCTATACGCCGAGGGTCTGGCGTTGATGTCTGCAACGTTTATGATGGCCATGCTCAACCTTATTCCAGGCATTACATTCATCATGGCCGCATCCTCCAGATTGGAAAAATTAAATTTGAAAGCAGCAGAAGGAAAGGCGAAGGTGATAGGAACAGCACTTGGAATTAGTGGGGCAATGCTGTTGACCTTTTTCAAAGGGGTTCAAATTAATATTTGGTCTTCCAATATCAATCTTATGCATCCACATCCAAACCAAAATGGGCATATTGGACCGCAACATCCAGGCTTTAATAATAAACTCTTGGGCGTTCCGTGTGCCATAGGAAGCTGCTGCTCTTTTTCTCTGTGGCTCATAATTCAGGCTAAGATGAATGAAGAATACCCAAACTATCCCAGCTTTGATGTCCACAACTGGAGCCATACAAGCCATTGTTCTTGCTCTCTGTGTTGA 726 0.416 MKGEYNLMERLKPILLMVFVQIAFSAVNIFYKLAINDGMSMRIATAYRLTFASAFTIPTALIFDRKKRPKITWRMLFMGFLCGLFGGSLFLNLYAEGLALMSATFMMAMLNLIPGITFIMAASSRLEKLNLKAAEGKAKVIGTALGISGAMLLTFFKGVQINIWSSNINLMHPHPNQNGHIGPQHPGFNNKLLGVPCAIGSCCSFSLWLIIQAKMNEEYPNYPSFDVHNWSHTSHCSCSLC. 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05478 241 PANTHER WAT1-RELATED PROTEIN 12 221 IPR030184 GO:0016020|GO:0022857
Seca11g05478 241 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Seca11g05478 241 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05478 Seca-Chr11 153046594 153051187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05478 11 218 Nodulin-like Gene Family AT1G25270 40.865 6.53e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05478 - - gsj:114424758 322.783