Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05470 ATGAAGGATGCTAATATTGTATTGCAACGATTGAAACCAGACATCCTAATGGTGTTTGCGCAGATTGCATTTGCGGCGGTGAATATCATATACAAACTCGCCATTAATGATGGAATGAGTATGAGAGTCGCCACTGCTTATCGCCTCATTTGTGCATCGGCTTTCACTGTCCCCGTTGCTCTTATCTTTGATAGGAAGAGACCAAAGATTACTTGGAGTGTGCTTTCTAAGGCATTTCTATGTGGATTATTTGGGGGAAGTTTATACCTAAACCTTTACCTTGAGGCCCTGGCTTTGACATCGGCAACATTTATGTTGGCCGTGGTGAACCTTATTCCGGCCATTACCTTTATCATGGCTGTAACTTCCGGGTTGGACAAATTAAATTTGGGAGTAGCAGCAGGAAGGGCCAAGGTAATAGGAACAATAATGGGGATTAGTGGGGCAATGATAATGACCTTTTTCAAAGGCCTAGAAATTAATATTTGGTCTTCCAATATAAACCTTTTACATCCAAACCAAAATGGACACGTGGCATCGCGACATGCAGACTTTCGGAGTAAACTATTGGGTGTTCCAATGGCCTTAGTCAGCAGCTGCTCTTTTTCTTTGTGGTTCATCATTCAGGCCAAGTTGAATCAGGAATACCCAAGCCCTCACTCAAGTGCAGCTTTAATGTCCACAATGGGAGCCATTCAGGCTACTGTTATTGCTCTTTGTGTTGATAGAGATTGGAGCCAATGGAAGCTGAATAACAATATCAGGCTTCTAACTGTCATCTATCCGGGGATTGTGGTCTCTGGATTAGTGGTTATGGTAATTGCCTGGTGCATAAGAATGAGAGGCCCTCTGTTTGCCTCTGTTTTCAATCCTCTACAACTTTTGCTTGTGGCTATCGCTGCTTATTTGTTGTTGGATGAGAAATTGTATTTAGGATGTGTGCTTGGATCAGTGATGATTGTATGCGGTCTCTACGCGGTGCTTTGGGGTCAAGGCAAAGAAATGAAAAACAAGAAGACTCAGTTAGTGCCATTAGAAATCACTAAAGAATCTGAAAATGTTGAGCTTGTTGTTGTGTCAACTCTTGTAGATAATGCTAAAGGTGTCCAAAGCTACCCCAATAAAGCCACTGCTATCGGGAATATTAATAATAGTATGAAATGA 1164 0.4192 MKDANIVLQRLKPDILMVFAQIAFAAVNIIYKLAINDGMSMRVATAYRLICASAFTVPVALIFDRKRPKITWSVLSKAFLCGLFGGSLYLNLYLEALALTSATFMLAVVNLIPAITFIMAVTSGLDKLNLGVAAGRAKVIGTIMGISGAMIMTFFKGLEINIWSSNINLLHPNQNGHVASRHADFRSKLLGVPMALVSSCSFSLWFIIQAKLNQEYPSPHSSAALMSTMGAIQATVIALCVDRDWSQWKLNNNIRLLTVIYPGIVVSGLVVMVIAWCIRMRGPLFASVFNPLQLLLVAIAAYLLLDEKLYLGCVLGSVMIVCGLYAVLWGQGKEMKNKKTQLVPLEITKESENVELVVVSTLVDNAKGVQSYPNKATAIGNINNSMK. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05470 387 PANTHER WAT1-RELATED PROTEIN 15 339 IPR030184 GO:0016020|GO:0022857
Seca11g05470 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
Seca11g05470 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Seca11g05470 387 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Seca11g05470 387 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05470 Seca-Chr11 152870399 152878509 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05470 11 356 Nodulin-like Gene Family AT1G25270 40.922 3.86e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05470 - - gsj:114424758 518.079