Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g05467 ATGAATGATGTATGGAAACTAGTGGATAGATTAAAGCCAACTTTGTTGATGGTGTTGGTGCAGATTGTATATGCTTCTGTAAATGTGCTTTACAAGCTCGCCATAAATGATGGAATGAGCATTAGGGTAGTCACTGCCTACCGCCTTATTTTCGCACTACCTTTCACTTTTCTTCTCGCTCTTGTTTTTGAAAGCAGAAAGAACAGGCCAAAGCTGACATGGAGGGTGCTTTTCATGTCATTCTTTTGTGGCCTATTTGGAGCAAGTCTATTGCATAACCTTTTCCTTGAGGCCTTGGATCTGGTGTCAGCAACATATGCTACCGCTGTTTATAATCTCACTCCTGCTGTTACTTTTATCTTGGCCATCTTCTGCGGCATGGAAAAGTTAAATATGCAAACCCCAGCGGGGAAGGCCAAGGTATTAGGAACAATAATAGGAATTGGTGGGTCAATGCTGCTGACATTTTTCAAAGGGGTAGAAATTAACCTTTGGACCTTCCGCATTAATCTTCTGCATCAAAATGGCCAAATAGCAACTATGCATACTGGCTCTGGTGGTAAAAAATTGCTGGGCTTTCTGTGTGGTTTTGGAGGCTGCTTCAGTTTTGCATTATGGCTCATCATTCAGTCTAAGATGAGTAAAGAATATCCAAGCCAATACTCAAGCACAGCATTGATGACCTTAATGGGGGCAATACAAGCCACTGCCTTTGCCCTTTGTGTTGAGAAAGATTGGAATCAATGGAAGTTGGATTGGAATATTAGGCTTCTAACTGCAGCTTATTCAGGAATTGTGGCCTCCGGAGCTATGGTTATTATCATTGCATGGTGTGTACGGATGAGAGGGCCAATGTTTGCATCTGTTTTCAACCCTCTCATGCTTGTGCTTGTGGCTATTGCTGGTTCCTTGATGTTAGATGAGAACTTATATGTGGGAAGTGTAATTGGAGCCGGGCTAATTGTGTGTGGCTTGTACATGGTGCTTTGGGGCAAGAGCAAAGAAATGAAAAAGGTGAATCACTTGGTGTCTTCAGAAATCAGCCAAGAACATAAAGCAAGTGAGGTTGTTGTCATGTCCCCCATGACAAATAATGACAATGGTGACTGCTGTGACAAATACACACACCAGCCAAGGTTTCATGACGATTCATCGAATGCATTATAA 1167 0.4233 MNDVWKLVDRLKPTLLMVLVQIVYASVNVLYKLAINDGMSIRVVTAYRLIFALPFTFLLALVFESRKNRPKLTWRVLFMSFFCGLFGASLLHNLFLEALDLVSATYATAVYNLTPAVTFILAIFCGMEKLNMQTPAGKAKVLGTIIGIGGSMLLTFFKGVEINLWTFRINLLHQNGQIATMHTGSGGKKLLGFLCGFGGCFSFALWLIIQSKMSKEYPSQYSSTALMTLMGAIQATAFALCVEKDWNQWKLDWNIRLLTAAYSGIVASGAMVIIIAWCVRMRGPMFASVFNPLMLVLVAIAGSLMLDENLYVGSVIGAGLIVCGLYMVLWGKSKEMKKVNHLVSSEISQEHKASEVVVMSPMTNNDNGDCCDKYTHQPRFHDDSSNAL. 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g05467 388 PANTHER WAT1-RELATED PROTEIN 13 344 IPR030184 GO:0016020|GO:0022857
Seca11g05467 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Seca11g05467 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Seca11g05467 388 Pfam EamA-like transporter family 13 155 IPR000620 GO:0016020
Seca11g05467 388 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g05467 Seca-Chr11 152767685 152770801 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g05467 1 355 Nodulin-like Gene Family AT1G68170 42.458 2.11e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g05467 - - gmx:100813812 543.117